Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:27321159-28431172

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgef3 14 27114899 to 27403911 289012 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 3
Tssr124736 14 27335642 to 27335654 12 + TSS region transcription start site region 124736
Tssr124737 14 27335792 to 27335828 36 + TSS region transcription start site region 124737
Cpgi6254 14 27335815 to 27336641 826 CpG island CpG island 6254
Tssr124738 14 27336023 to 27336067 44 + TSS region transcription start site region 124738
Tssr127807 14 27336644 to 27336648 4 - TSS region transcription start site region 127807
Tssr127808 14 27337227 to 27337255 28 - TSS region transcription start site region 127808
Tssr124739 14 27337758 to 27337760 2 + TSS region transcription start site region 124739
Tssr4351 14 27341770 to 27341781 11 + TSS region transcription start site region 4351
Tssr124740 14 27342056 to 27342060 4 + TSS region transcription start site region 124740
Tssr124741 14 27344585 to 27344589 4 + TSS region transcription start site region 124741
Tssr4352 14 27348373 to 27348383 10 + TSS region transcription start site region 4352
Tssr127809 14 27348499 to 27348519 20 - TSS region transcription start site region 127809
Tssr4353 14 27351688 to 27351708 20 - TSS region transcription start site region 4353
Tssr124742 14 27360717 to 27360744 27 + TSS region transcription start site region 124742
Tssr124743 14 27361065 to 27361107 42 + TSS region transcription start site region 124743
Tssr124744 14 27362804 to 27362816 12 + TSS region transcription start site region 124744
Tssr127810 14 27379422 to 27379438 16 - TSS region transcription start site region 127810
Tssr127811 14 27379460 to 27379477 17 - TSS region transcription start site region 127811
Tssr124745 14 27379491 to 27379494 3 + TSS region transcription start site region 124745
Tssr124746 14 27379530 to 27379593 63 + TSS region transcription start site region 124746
Tssr124747 14 27379594 to 27379615 21 + TSS region transcription start site region 124747
Tssr124748 14 27379622 to 27379635 13 + TSS region transcription start site region 124748
Tssr124749 14 27379645 to 27379661 16 + TSS region transcription start site region 124749
Tssr124750 14 27379666 to 27379682 16 + TSS region transcription start site region 124750
Tssr4354 14 27379684 to 27379693 9 + TSS region transcription start site region 4354
Gm23633 14 27380732 to 27380850 118 - miRNA gene predicted gene, 23633
Gm34702 14 27387620 to 27400232 12612 - lncRNA gene predicted gene, 34702
Tssr124751 14 27403136 to 27403150 14 + TSS region transcription start site region 124751
Tssr124752 14 27403340 to 27403343 3 + TSS region transcription start site region 124752
Cpgi6255 14 27428428 to 27429824 1396 CpG island CpG island 6255
Tssr127812 14 27428655 to 27428682 27 - TSS region transcription start site region 127812
Tssr124753 14 27428790 to 27428874 84 + TSS region transcription start site region 124753
Tasor 14 27428840 to 27483555 54715 + protein coding gene transcription activation suppressor
Tssr124754 14 27428878 to 27428890 12 + TSS region transcription start site region 124754
Tssr127813 14 27429301 to 27429346 45 - TSS region transcription start site region 127813
Tssr124755 14 27429971 to 27429975 4 + TSS region transcription start site region 124755
Tssr124756 14 27431341 to 27431346 5 + TSS region transcription start site region 124756
Tssr124757 14 27438832 to 27438836 4 + TSS region transcription start site region 124757
Ccdc66 14 27481090 to 27508460 27370 - protein coding gene coiled-coil domain containing 66
Gm22485 14 27489269 to 27489377 108 + snRNA gene predicted gene, 22485
Cpgi6256 14 27508072 to 27508655 583 CpG island CpG island 6256
Tssr127814 14 27508463 to 27508503 40 - TSS region transcription start site region 127814
Gm25697 14 27527751 to 27527848 97 - snoRNA gene predicted gene, 25697
Gm7604 14 27551188 to 27552152 964 - pseudogene predicted gene 7604
Tssr4355 14 27555375 to 27555381 6 - TSS region transcription start site region 4355
Cpgi6257 14 27621791 to 27623006 1215 CpG island CpG island 6257
Tssr124758 14 27622326 to 27622368 42 + TSS region transcription start site region 124758
Tssr124759 14 27622386 to 27622412 26 + TSS region transcription start site region 124759
Erc2 14 27622428 to 28478537 856109 + protein coding gene ELKS/RAB6-interacting/CAST family member 2
Tssr124760 14 27622433 to 27622543 110 + TSS region transcription start site region 124760
Tssr124761 14 27623640 to 27623698 58 + TSS region transcription start site region 124761
Gm18398 14 27714377 to 27715877 1500 + pseudogene predicted gene, 18398
Tssr4356 14 27745648 to 27745650 2 + TSS region transcription start site region 4356
Tssr124762 14 27768561 to 27768563 2 + TSS region transcription start site region 124762
Gm45645 14 27838165 to 27876217 38052 - antisense lncRNA gene predicted gene 45645
Tssr124763 14 27876065 to 27876104 39 + TSS region transcription start site region 124763
Tssr124764 14 27876142 to 27876153 11 + TSS region transcription start site region 124764
Tssr124765 14 27876159 to 27876172 13 + TSS region transcription start site region 124765
Tssr124766 14 27876393 to 27876420 27 + TSS region transcription start site region 124766
Tssr124767 14 27876521 to 27876541 20 + TSS region transcription start site region 124767
Gm34996 14 27876669 to 27884501 7832 + lncRNA gene predicted gene, 34996
Tssr124768 14 28008239 to 28008242 3 + TSS region transcription start site region 124768
Tssr124769 14 28029318 to 28029322 4 + TSS region transcription start site region 124769
Tssr124770 14 28030385 to 28030393 8 + TSS region transcription start site region 124770
Tssr124771 14 28031475 to 28031479 4 + TSS region transcription start site region 124771
Tssr124772 14 28057390 to 28057393 3 + TSS region transcription start site region 124772
Tssr124773 14 28152336 to 28152338 2 + TSS region transcription start site region 124773
Recrq10 14 28200000 to 60900000 32700000 QTL recombination rate in male meiosis QTL 10
D14Mit44 14 28240651 to 28240799 148 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 44
Tssr124774 14 28284567 to 28284570 3 + TSS region transcription start site region 124774
Tssr127815 14 28308720 to 28308731 11 - TSS region transcription start site region 127815
Tssr124775 14 28380065 to 28380069 4 + TSS region transcription start site region 124775
Tssr124776 14 28387814 to 28387827 13 + TSS region transcription start site region 124776
Gm20242 14 28415997 to 28417851 1854 + unclassified gene predicted gene, 20242