Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:26962428-29138537

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166 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mcsq2 14 21810000 to 28728000 6918000 QTL methacholine sensitivity QTL 2, baseline
Appl1 14 26918986 to 26971205 52219 - protein coding gene adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
Tssr4348 14 26965886 to 26965890 4 - TSS region transcription start site region 4348
Gm41114 14 26966234 to 26968808 2574 - lncRNA gene predicted gene, 41114
Cpgi6250 14 26969742 to 26970935 1193 CpG island CpG island 6250
Tssr124716 14 26969910 to 26969964 54 + TSS region transcription start site region 124716
Tssr4349 14 26970395 to 26970403 8 - TSS region transcription start site region 4349
Tssr127800 14 26970447 to 26970556 109 - TSS region transcription start site region 127800
Tssr127801 14 26970558 to 26970596 38 - TSS region transcription start site region 127801
Tssr127802 14 26970820 to 26970843 23 - TSS region transcription start site region 127802
Cpgi6251 14 26976875 to 26977101 226 CpG island CpG island 6251
Tssr127803 14 26981625 to 26981630 5 - TSS region transcription start site region 127803
Hesx1 14 26994424 to 27002329 7905 + protein coding gene homeobox gene expressed in ES cells
Tssr124717 14 27000493 to 27000507 14 + TSS region transcription start site region 124717
Tssr124718 14 27000666 to 27000679 13 + TSS region transcription start site region 124718
Tssr124719 14 27000705 to 27000716 11 + TSS region transcription start site region 124719
D14Mit202 14 27019363 to 27019507 144 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 202
Cpgi6252 14 27038820 to 27040076 1256 CpG island CpG island 6252
Tssr124720 14 27038988 to 27038993 5 + TSS region transcription start site region 124720
Il17rd 14 27038989 to 27107286 68297 + protein coding gene interleukin 17 receptor D
Tssr124721 14 27038995 to 27039008 13 + TSS region transcription start site region 124721
Tssr124722 14 27039014 to 27039050 36 + TSS region transcription start site region 124722
Tssr124723 14 27039066 to 27039077 11 + TSS region transcription start site region 124723
Tssr124724 14 27067388 to 27067401 13 + TSS region transcription start site region 124724
Tssr124725 14 27091772 to 27091776 4 + TSS region transcription start site region 124725
Cpgi6253 14 27114525 to 27115459 934 CpG island CpG island 6253
Tssr124726 14 27114847 to 27114894 47 + TSS region transcription start site region 124726
Tssr124727 14 27114895 to 27114909 14 + TSS region transcription start site region 124727
Arhgef3 14 27114899 to 27403911 289012 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 3
Tssr124728 14 27115158 to 27115201 43 + TSS region transcription start site region 124728
Tssr124729 14 27141852 to 27141872 20 + TSS region transcription start site region 124729
Tssr124730 14 27210335 to 27210350 15 + TSS region transcription start site region 124730
Gm7591 14 27210397 to 27211249 852 + pseudogene predicted gene 7591
Tssr124731 14 27229872 to 27229893 21 + TSS region transcription start site region 124731
Tssr127804 14 27234407 to 27234418 11 - TSS region transcription start site region 127804
Tssr4350 14 27237918 to 27237937 19 - TSS region transcription start site region 4350
Tssr127805 14 27237938 to 27237949 11 - TSS region transcription start site region 127805
Tssr124732 14 27238009 to 27238012 3 + TSS region transcription start site region 124732
Tssr124733 14 27238018 to 27238046 28 + TSS region transcription start site region 124733
Tssr124734 14 27238048 to 27238063 15 + TSS region transcription start site region 124734
Gm49616 14 27238062 to 27240494 2432 + unclassified gene predicted gene, 49616
D14Mit112 14 27250585 to 27250713 128 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 112
Gm34848 14 27260550 to 27265514 4964 - lncRNA gene predicted gene, 34848
Gm34754 14 27271352 to 27282798 11446 - lncRNA gene predicted gene, 34754
Tssr127806 14 27271422 to 27271429 7 - TSS region transcription start site region 127806
Tssr124735 14 27307971 to 27307983 12 + TSS region transcription start site region 124735
Tssr124736 14 27335642 to 27335654 12 + TSS region transcription start site region 124736
Tssr124737 14 27335792 to 27335828 36 + TSS region transcription start site region 124737
Cpgi6254 14 27335815 to 27336641 826 CpG island CpG island 6254
Tssr124738 14 27336023 to 27336067 44 + TSS region transcription start site region 124738
Tssr127807 14 27336644 to 27336648 4 - TSS region transcription start site region 127807
Tssr127808 14 27337227 to 27337255 28 - TSS region transcription start site region 127808
Tssr124739 14 27337758 to 27337760 2 + TSS region transcription start site region 124739
Tssr4351 14 27341770 to 27341781 11 + TSS region transcription start site region 4351
Tssr124740 14 27342056 to 27342060 4 + TSS region transcription start site region 124740
Tssr124741 14 27344585 to 27344589 4 + TSS region transcription start site region 124741
Tssr4352 14 27348373 to 27348383 10 + TSS region transcription start site region 4352
Tssr127809 14 27348499 to 27348519 20 - TSS region transcription start site region 127809
Tssr4353 14 27351688 to 27351708 20 - TSS region transcription start site region 4353
Tssr124742 14 27360717 to 27360744 27 + TSS region transcription start site region 124742
Tssr124743 14 27361065 to 27361107 42 + TSS region transcription start site region 124743
Tssr124744 14 27362804 to 27362816 12 + TSS region transcription start site region 124744
Tssr127810 14 27379422 to 27379438 16 - TSS region transcription start site region 127810
Tssr127811 14 27379460 to 27379477 17 - TSS region transcription start site region 127811
Tssr124745 14 27379491 to 27379494 3 + TSS region transcription start site region 124745
Tssr124746 14 27379530 to 27379593 63 + TSS region transcription start site region 124746
Tssr124747 14 27379594 to 27379615 21 + TSS region transcription start site region 124747
Tssr124748 14 27379622 to 27379635 13 + TSS region transcription start site region 124748
Tssr124749 14 27379645 to 27379661 16 + TSS region transcription start site region 124749
Tssr124750 14 27379666 to 27379682 16 + TSS region transcription start site region 124750
Tssr4354 14 27379684 to 27379693 9 + TSS region transcription start site region 4354
Gm23633 14 27380732 to 27380850 118 - miRNA gene predicted gene, 23633
Gm34702 14 27387620 to 27400232 12612 - lncRNA gene predicted gene, 34702
Tssr124751 14 27403136 to 27403150 14 + TSS region transcription start site region 124751
Tssr124752 14 27403340 to 27403343 3 + TSS region transcription start site region 124752
Cpgi6255 14 27428428 to 27429824 1396 CpG island CpG island 6255
Tssr127812 14 27428655 to 27428682 27 - TSS region transcription start site region 127812
Tssr124753 14 27428790 to 27428874 84 + TSS region transcription start site region 124753
Tasor 14 27428840 to 27483555 54715 + protein coding gene transcription activation suppressor
Tssr124754 14 27428878 to 27428890 12 + TSS region transcription start site region 124754
Tssr127813 14 27429301 to 27429346 45 - TSS region transcription start site region 127813
Tssr124755 14 27429971 to 27429975 4 + TSS region transcription start site region 124755
Tssr124756 14 27431341 to 27431346 5 + TSS region transcription start site region 124756
Tssr124757 14 27438832 to 27438836 4 + TSS region transcription start site region 124757
Ccdc66 14 27481090 to 27508460 27370 - protein coding gene coiled-coil domain containing 66
Gm22485 14 27489269 to 27489377 108 + snRNA gene predicted gene, 22485
Cpgi6256 14 27508072 to 27508655 583 CpG island CpG island 6256
Tssr127814 14 27508463 to 27508503 40 - TSS region transcription start site region 127814
Gm25697 14 27527751 to 27527848 97 - snoRNA gene predicted gene, 25697
Gm7604 14 27551188 to 27552152 964 - pseudogene predicted gene 7604
Tssr4355 14 27555375 to 27555381 6 - TSS region transcription start site region 4355
Cpgi6257 14 27621791 to 27623006 1215 CpG island CpG island 6257
Tssr124758 14 27622326 to 27622368 42 + TSS region transcription start site region 124758
Tssr124759 14 27622386 to 27622412 26 + TSS region transcription start site region 124759
Erc2 14 27622428 to 28478537 856109 + protein coding gene ELKS/RAB6-interacting/CAST family member 2
Tssr124760 14 27622433 to 27622543 110 + TSS region transcription start site region 124760
Tssr124761 14 27623640 to 27623698 58 + TSS region transcription start site region 124761
Gm18398 14 27714377 to 27715877 1500 + pseudogene predicted gene, 18398
Tssr4356 14 27745648 to 27745650 2 + TSS region transcription start site region 4356
Tssr124762 14 27768561 to 27768563 2 + TSS region transcription start site region 124762
Gm45645 14 27838165 to 27876217 38052 - antisense lncRNA gene predicted gene 45645
Tssr124763 14 27876065 to 27876104 39 + TSS region transcription start site region 124763
Tssr124764 14 27876142 to 27876153 11 + TSS region transcription start site region 124764
Tssr124765 14 27876159 to 27876172 13 + TSS region transcription start site region 124765
Tssr124766 14 27876393 to 27876420 27 + TSS region transcription start site region 124766
Tssr124767 14 27876521 to 27876541 20 + TSS region transcription start site region 124767
Gm34996 14 27876669 to 27884501 7832 + lncRNA gene predicted gene, 34996
Tssr124768 14 28008239 to 28008242 3 + TSS region transcription start site region 124768
Tssr124769 14 28029318 to 28029322 4 + TSS region transcription start site region 124769
Tssr124770 14 28030385 to 28030393 8 + TSS region transcription start site region 124770
Tssr124771 14 28031475 to 28031479 4 + TSS region transcription start site region 124771
Tssr124772 14 28057390 to 28057393 3 + TSS region transcription start site region 124772
Tssr124773 14 28152336 to 28152338 2 + TSS region transcription start site region 124773
Recrq10 14 28200000 to 60900000 32700000 QTL recombination rate in male meiosis QTL 10
D14Mit44 14 28240651 to 28240799 148 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 44
Tssr124774 14 28284567 to 28284570 3 + TSS region transcription start site region 124774
Tssr127815 14 28308720 to 28308731 11 - TSS region transcription start site region 127815
Tssr124775 14 28380065 to 28380069 4 + TSS region transcription start site region 124775
Tssr124776 14 28387814 to 28387827 13 + TSS region transcription start site region 124776
Gm20242 14 28415997 to 28417851 1854 + unclassified gene predicted gene, 20242
Tssr124777 14 28443392 to 28443402 10 + TSS region transcription start site region 124777
Tssr124778 14 28504565 to 28504605 40 + TSS region transcription start site region 124778
Tssr124779 14 28504634 to 28504656 22 + TSS region transcription start site region 124779
Cpgi6258 14 28504656 to 28506883 2227 CpG island CpG island 6258
Tssr124780 14 28504678 to 28504689 11 + TSS region transcription start site region 124780
Tssr124781 14 28504736 to 28504762 26 + TSS region transcription start site region 124781
Tssr124782 14 28504796 to 28504826 30 + TSS region transcription start site region 124782
Tssr124783 14 28505463 to 28505491 28 + TSS region transcription start site region 124783
Wnt5a 14 28505473 to 28527448 21975 + protein coding gene wingless-type MMTV integration site family, member 5A
Tssr124784 14 28505495 to 28505509 14 + TSS region transcription start site region 124784
Tssr124785 14 28505542 to 28505569 27 + TSS region transcription start site region 124785
Tssr124786 14 28505606 to 28505617 11 + TSS region transcription start site region 124786
Tssr124787 14 28505759 to 28505772 13 + TSS region transcription start site region 124787
Tssr124788 14 28505781 to 28505797 16 + TSS region transcription start site region 124788
Tssr124789 14 28505817 to 28505835 18 + TSS region transcription start site region 124789
Cpgi6259 14 28507592 to 28507811 219 CpG island CpG island 6259
Gm2670 14 28508074 to 28511392 3318 - antisense lncRNA gene predicted gene 2670
Cpgi6260 14 28509070 to 28509850 780 CpG island CpG island 6260
Tssr124790 14 28509790 to 28509820 30 + TSS region transcription start site region 124790
Tssr124791 14 28510098 to 28510119 21 + TSS region transcription start site region 124791
Cpgi6261 14 28510463 to 28510834 371 CpG island CpG island 6261
Cpgi6262 14 28511313 to 28511639 326 CpG island CpG island 6262
Tssr124792 14 28511344 to 28511381 37 + TSS region transcription start site region 124792
Cpgi6263 14 28518127 to 28518616 489 CpG island CpG island 6263
Cpgi6264 14 28522454 to 28522931 477 CpG island CpG island 6264
Tssr124793 14 28526179 to 28526195 16 + TSS region transcription start site region 124793
Gm35164 14 28649662 to 28698049 48387 + lincRNA gene predicted gene, 35164
Tssr124794 14 28649697 to 28649717 20 + TSS region transcription start site region 124794
Tssr127816 14 28674814 to 28674819 5 - TSS region transcription start site region 127816
Gm18079 14 28724375 to 28725259 884 + pseudogene predicted gene, 18079
Gm35217 14 28777427 to 28798421 20994 - lincRNA gene predicted gene, 35217
Cacna2d3 14 28904943 to 29721864 816921 - protein coding gene calcium channel, voltage-dependent, alpha2/delta subunit 3
Tssr127817 14 28909052 to 28909056 4 - TSS region transcription start site region 127817
Tssr127818 14 28969374 to 28969381 7 - TSS region transcription start site region 127818
Tssr127819 14 28969466 to 28969476 10 - TSS region transcription start site region 127819
Gm23999 14 29009696 to 29009799 103 - rRNA gene predicted gene, 23999
Tssr124795 14 29018077 to 29018082 5 + TSS region transcription start site region 124795
Tssr124796 14 29018107 to 29018119 12 + TSS region transcription start site region 124796
Tssr124797 14 29018205 to 29018226 21 + TSS region transcription start site region 124797
Lrtm1 14 29018208 to 29033642 15434 + protein coding gene leucine-rich repeats and transmembrane domains 1
Tssr124798 14 29018236 to 29018243 7 + TSS region transcription start site region 124798
Tssr124799 14 29018245 to 29018278 33 + TSS region transcription start site region 124799
Tssr127820 14 29018317 to 29018321 4 - TSS region transcription start site region 127820
Tssr124800 14 29021403 to 29021413 10 + TSS region transcription start site region 124800
Tssr124801 14 29021434 to 29021444 10 + TSS region transcription start site region 124801
Gm48004 14 29081302 to 29083805 2503 + antisense lncRNA gene predicted gene, 48004