Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:26227972-26589080

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cphx3 14 26220923 to 26235744 14821 + protein coding gene cytoplasmic polyadenylated homeobox 3
Duxbl3 14 26257962 to 26269436 11474 + protein coding gene double homeobox B-like 3
Gm18578 14 26302794 to 26304924 2130 + pseudogene predicted gene, 18578
Gm46445 14 26312495 to 26337327 24832 + lncRNA gene predicted gene, 46445
Gm34059 14 26315188 to 26324676 9488 - lincRNA gene predicted gene, 34059
Tssr124677 14 26331068 to 26331072 4 + TSS region transcription start site region 124677
Tssr124678 14 26357507 to 26357529 22 + TSS region transcription start site region 124678
Tssr124679 14 26357533 to 26357551 18 + TSS region transcription start site region 124679
4933413J09Rik 14 26357547 to 26400456 42909 + lincRNA gene RIKEN cDNA 4933413J09 gene
Crb1-ps 14 26375278 to 26376172 894 - pseudogene crumbs family member 1, photoreceptor morphogenesis associated, pseudogene
Slmapos2 14 26389199 to 26395521 6322 + lincRNA gene sarcolemma associated protein, opposite strand transcript 2
Gm34223 14 26398256 to 26404157 5901 - lncRNA gene predicted gene, 34223
C130057D09Rik 14 26407972 to 26409080 1108 unclassified gene RIKEN cDNA C130057D09 gene
Slmap 14 26413168 to 26534931 121763 - protein coding gene sarcolemma associated protein
Tssr127778 14 26414628 to 26414667 39 - TSS region transcription start site region 127778
Tssr127779 14 26439215 to 26439236 21 - TSS region transcription start site region 127779
Tssr127780 14 26439255 to 26439269 14 - TSS region transcription start site region 127780
Tssr127781 14 26442622 to 26442691 69 - TSS region transcription start site region 127781
Tssr127782 14 26442692 to 26442701 9 - TSS region transcription start site region 127782
Tssr127783 14 26442723 to 26442734 11 - TSS region transcription start site region 127783
Tssr4347 14 26442760 to 26442764 4 - TSS region transcription start site region 4347
Tssr127784 14 26442843 to 26442852 9 - TSS region transcription start site region 127784
Tssr127785 14 26442874 to 26442877 3 - TSS region transcription start site region 127785
Tssr127786 14 26463612 to 26463629 17 - TSS region transcription start site region 127786
Gm24031 14 26497655 to 26497785 130 + snoRNA gene predicted gene, 24031
D14Ertd574e 14 26508234 to 26508481 247 DNA segment DNA segment, Chr 14, ERATO Doi 574, expressed
Gm2178 14 26514554 to 26514910 356 + pseudogene predicted gene 2178
Tssr127787 14 26515942 to 26515961 19 - TSS region transcription start site region 127787
Tssr127788 14 26523030 to 26523031 1 - TSS region transcription start site region 127788
Cpgi6246 14 26533294 to 26535140 1846 CpG island CpG island 6246
Tssr127789 14 26534870 to 26534929 59 - TSS region transcription start site region 127789
D14Mit51 14 26559415 to 26559616 201 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 51
Gm18215 14 26562305 to 26562953 648 - pseudogene predicted gene, 18215
Tssr124680 14 26565737 to 26565755 18 + TSS region transcription start site region 124680
Gm7565 14 26565766 to 26566388 622 + pseudogene predicted gene 7565
Dennd6a 14 26573858 to 26634322 60464 + protein coding gene DENN/MADD domain containing 6A
Cpgi6247 14 26579312 to 26580197 885 CpG island CpG island 6247
Tssr124681 14 26579535 to 26579612 77 + TSS region transcription start site region 124681