Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:25867655-27127785

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147 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Anxa11 14 25842156 to 25886804 44648 + protein coding gene annexin A11
Anxa11os 14 25856777 to 25870266 13489 - antisense lncRNA gene annexin A11, opposite strand
Tssr124671 14 25868784 to 25868809 25 + TSS region transcription start site region 124671
Tssr124672 14 25868827 to 25868856 29 + TSS region transcription start site region 124672
Tssr124673 14 25869610 to 25869621 11 + TSS region transcription start site region 124673
Tssr124674 14 25869622 to 25869629 7 + TSS region transcription start site region 124674
Tssr124675 14 25869635 to 25869636 1 + TSS region transcription start site region 124675
Tssr4346 14 25869642 to 25869647 5 + TSS region transcription start site region 4346
Tssr124676 14 25872857 to 25872870 13 + TSS region transcription start site region 124676
Plac9a 14 25888403 to 25902893 14490 - protein coding gene placenta specific 9a
Tmem254a 14 25923300 to 25927672 4372 - protein coding gene transmembrane protein 254a
Gm19013 14 25939359 to 25940580 1221 - pseudogene predicted gene, 19013
Cphx1 14 25941559 to 25956374 14815 + protein coding gene cytoplasmic polyadenylated homeobox 1
Duxbl1 14 25978577 to 25990088 11511 + protein coding gene double homeobox B-like 1
Gm2260 14 26016431 to 26025837 9406 + pseudogene predicted gene 2260
Gm9780 14 26027782 to 26042963 15181 - protein coding gene predicted gene 9780
Tmem254c 14 26063919 to 26067355 3436 - protein coding gene transmembrane protein 254c
Gm19014 14 26079108 to 26080296 1188 - pseudogene predicted gene, 19014
Cphx2 14 26081516 to 26096127 14611 + protein coding gene cytoplasmic polyadenylated homeobox 2
Duxbl2 14 26118349 to 26129763 11414 + protein coding gene double homeobox B-like 2
Gm2274 14 26156036 to 26163648 7612 + pseudogene predicted gene 2274
Plac9b 14 26167316 to 26182351 15035 - protein coding gene placenta specific 9b
Tmem254b 14 26203366 to 26207025 3659 - protein coding gene transmembrane protein 254b
Gm19015 14 26218722 to 26219910 1188 - pseudogene predicted gene, 19015
Cphx3 14 26220923 to 26235744 14821 + protein coding gene cytoplasmic polyadenylated homeobox 3
Duxbl3 14 26257962 to 26269436 11474 + protein coding gene double homeobox B-like 3
Gm18578 14 26302794 to 26304924 2130 + pseudogene predicted gene, 18578
Gm46445 14 26312495 to 26337327 24832 + lncRNA gene predicted gene, 46445
Gm34059 14 26315188 to 26324676 9488 - lincRNA gene predicted gene, 34059
Tssr124677 14 26331068 to 26331072 4 + TSS region transcription start site region 124677
Tssr124678 14 26357507 to 26357529 22 + TSS region transcription start site region 124678
Tssr124679 14 26357533 to 26357551 18 + TSS region transcription start site region 124679
4933413J09Rik 14 26357547 to 26400456 42909 + lincRNA gene RIKEN cDNA 4933413J09 gene
Crb1-ps 14 26375278 to 26376172 894 - pseudogene crumbs family member 1, photoreceptor morphogenesis associated, pseudogene
Slmapos2 14 26389199 to 26395521 6322 + lincRNA gene sarcolemma associated protein, opposite strand transcript 2
Gm34223 14 26398256 to 26404157 5901 - lncRNA gene predicted gene, 34223
C130057D09Rik 14 26407972 to 26409080 1108 unclassified gene RIKEN cDNA C130057D09 gene
Slmap 14 26413168 to 26534931 121763 - protein coding gene sarcolemma associated protein
Tssr127778 14 26414628 to 26414667 39 - TSS region transcription start site region 127778
Tssr127779 14 26439215 to 26439236 21 - TSS region transcription start site region 127779
Tssr127780 14 26439255 to 26439269 14 - TSS region transcription start site region 127780
Tssr127781 14 26442622 to 26442691 69 - TSS region transcription start site region 127781
Tssr127782 14 26442692 to 26442701 9 - TSS region transcription start site region 127782
Tssr127783 14 26442723 to 26442734 11 - TSS region transcription start site region 127783
Tssr4347 14 26442760 to 26442764 4 - TSS region transcription start site region 4347
Tssr127784 14 26442843 to 26442852 9 - TSS region transcription start site region 127784
Tssr127785 14 26442874 to 26442877 3 - TSS region transcription start site region 127785
Tssr127786 14 26463612 to 26463629 17 - TSS region transcription start site region 127786
Gm24031 14 26497655 to 26497785 130 + snoRNA gene predicted gene, 24031
D14Ertd574e 14 26508234 to 26508481 247 DNA segment DNA segment, Chr 14, ERATO Doi 574, expressed
Gm2178 14 26514554 to 26514910 356 + pseudogene predicted gene 2178
Tssr127787 14 26515942 to 26515961 19 - TSS region transcription start site region 127787
Tssr127788 14 26523030 to 26523031 1 - TSS region transcription start site region 127788
Cpgi6246 14 26533294 to 26535140 1846 CpG island CpG island 6246
Tssr127789 14 26534870 to 26534929 59 - TSS region transcription start site region 127789
D14Mit51 14 26559415 to 26559616 201 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 51
Gm18215 14 26562305 to 26562953 648 - pseudogene predicted gene, 18215
Tssr124680 14 26565737 to 26565755 18 + TSS region transcription start site region 124680
Gm7565 14 26565766 to 26566388 622 + pseudogene predicted gene 7565
Dennd6a 14 26573858 to 26634322 60464 + protein coding gene DENN/MADD domain containing 6A
Cpgi6247 14 26579312 to 26580197 885 CpG island CpG island 6247
Tssr124681 14 26579535 to 26579612 77 + TSS region transcription start site region 124681
Tssr124682 14 26590138 to 26590152 14 + TSS region transcription start site region 124682
Tssr124683 14 26590542 to 26590599 57 + TSS region transcription start site region 124683
Tssr127790 14 26591567 to 26591574 7 - TSS region transcription start site region 127790
Tssr127791 14 26591622 to 26591634 12 - TSS region transcription start site region 127791
Tssr127792 14 26591639 to 26591650 11 - TSS region transcription start site region 127792
Tssr127793 14 26591668 to 26591677 9 - TSS region transcription start site region 127793
Tssr124684 14 26608541 to 26608577 36 + TSS region transcription start site region 124684
Tssr124685 14 26626869 to 26626896 27 + TSS region transcription start site region 124685
Arf4os 14 26628407 to 26638183 9776 - antisense lncRNA gene ADP-ribosylation factor 4, opposite strand
Tssr124686 14 26630940 to 26630962 22 + TSS region transcription start site region 124686
Tssr124687 14 26634746 to 26634750 4 + TSS region transcription start site region 124687
Cpgi6248 14 26637750 to 26638956 1206 CpG island CpG island 6248
Tssr124688 14 26638012 to 26638024 12 + TSS region transcription start site region 124688
Tssr124689 14 26638036 to 26638047 11 + TSS region transcription start site region 124689
Tssr124690 14 26638120 to 26638151 31 + TSS region transcription start site region 124690
Tssr124691 14 26638157 to 26638224 67 + TSS region transcription start site region 124691
Arf4 14 26638197 to 26657258 19061 + protein coding gene ADP-ribosylation factor 4
Tssr124692 14 26638237 to 26638249 12 + TSS region transcription start site region 124692
Tssr124693 14 26645589 to 26645593 4 + TSS region transcription start site region 124693
Tssr124694 14 26646706 to 26646715 9 + TSS region transcription start site region 124694
Tssr124695 14 26649246 to 26649249 3 + TSS region transcription start site region 124695
Tssr124696 14 26652236 to 26652241 5 + TSS region transcription start site region 124696
Tssr124697 14 26655886 to 26655964 78 + TSS region transcription start site region 124697
Tssr124698 14 26655984 to 26655997 13 + TSS region transcription start site region 124698
Tssr124699 14 26656001 to 26656040 39 + TSS region transcription start site region 124699
Tssr124700 14 26656082 to 26656099 17 + TSS region transcription start site region 124700
Tssr124701 14 26656103 to 26656116 13 + TSS region transcription start site region 124701
Tssr124702 14 26656170 to 26656185 15 + TSS region transcription start site region 124702
Tssr124703 14 26656484 to 26656503 19 + TSS region transcription start site region 124703
Pde12 14 26664117 to 26669846 5729 - protein coding gene phosphodiesterase 12
Cpgi6249 14 26668358 to 26670188 1830 CpG island CpG island 6249
Mir7672 14 26669547 to 26669608 61 - miRNA gene microRNA 7672
Tssr127794 14 26669626 to 26669691 65 - TSS region transcription start site region 127794
Tssr127795 14 26669835 to 26669846 11 - TSS region transcription start site region 127795
Tssr124704 14 26669939 to 26669971 32 + TSS region transcription start site region 124704
9930004E17Rik 14 26670010 to 26670507 497 + antisense lncRNA gene RIKEN cDNA 9930004E17 gene
Tssr124705 14 26673176 to 26673184 8 + TSS region transcription start site region 124705
Tssr124706 14 26691611 to 26691636 25 + TSS region transcription start site region 124706
Tssr124707 14 26691661 to 26691671 10 + TSS region transcription start site region 124707
Tssr124708 14 26693254 to 26693262 8 + TSS region transcription start site region 124708
Tssr124709 14 26693267 to 26693277 10 + TSS region transcription start site region 124709
Dnah12 14 26693274 to 26891703 198429 + protein coding gene dynein, axonemal, heavy chain 12
Tssr124710 14 26693285 to 26693296 11 + TSS region transcription start site region 124710
Tssr124711 14 26766172 to 26766202 30 + TSS region transcription start site region 124711
Tssr124712 14 26766324 to 26766332 8 + TSS region transcription start site region 124712
Tssr124713 14 26766442 to 26766456 14 + TSS region transcription start site region 124713
Gm34415 14 26804553 to 26808353 3800 + pseudogene predicted gene, 34415
4933407A17Rik 14 26834131 to 26836274 2143 unclassified gene RIKEN cDNA 4933407A17 gene
Asb14 14 26894588 to 26915257 20669 + protein coding gene ankyrin repeat and SOCS box-containing 14
Tssr124714 14 26894599 to 26894604 5 + TSS region transcription start site region 124714
Tssr124715 14 26894606 to 26894627 21 + TSS region transcription start site region 124715
Tssr127796 14 26916880 to 26916922 42 - TSS region transcription start site region 127796
Tssr127797 14 26917103 to 26917140 37 - TSS region transcription start site region 127797
Appl1 14 26918986 to 26971205 52219 - protein coding gene adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
Gm41115 14 26926455 to 26926762 307 + pseudogene predicted gene, 41115
Tssr127798 14 26928612 to 26928624 12 - TSS region transcription start site region 127798
Tssr127799 14 26939917 to 26939926 9 - TSS region transcription start site region 127799
Tssr4348 14 26965886 to 26965890 4 - TSS region transcription start site region 4348
Gm41114 14 26966234 to 26968808 2574 - lncRNA gene predicted gene, 41114
Cpgi6250 14 26969742 to 26970935 1193 CpG island CpG island 6250
Tssr124716 14 26969910 to 26969964 54 + TSS region transcription start site region 124716
Tssr4349 14 26970395 to 26970403 8 - TSS region transcription start site region 4349
Tssr127800 14 26970447 to 26970556 109 - TSS region transcription start site region 127800
Tssr127801 14 26970558 to 26970596 38 - TSS region transcription start site region 127801
Tssr127802 14 26970820 to 26970843 23 - TSS region transcription start site region 127802
Cpgi6251 14 26976875 to 26977101 226 CpG island CpG island 6251
Tssr127803 14 26981625 to 26981630 5 - TSS region transcription start site region 127803
Hesx1 14 26994424 to 27002329 7905 + protein coding gene homeobox gene expressed in ES cells
Tssr124717 14 27000493 to 27000507 14 + TSS region transcription start site region 124717
Tssr124718 14 27000666 to 27000679 13 + TSS region transcription start site region 124718
Tssr124719 14 27000705 to 27000716 11 + TSS region transcription start site region 124719
D14Mit202 14 27019363 to 27019507 144 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 202
Cpgi6252 14 27038820 to 27040076 1256 CpG island CpG island 6252
Tssr124720 14 27038988 to 27038993 5 + TSS region transcription start site region 124720
Il17rd 14 27038989 to 27107286 68297 + protein coding gene interleukin 17 receptor D
Tssr124721 14 27038995 to 27039008 13 + TSS region transcription start site region 124721
Tssr124722 14 27039014 to 27039050 36 + TSS region transcription start site region 124722
Tssr124723 14 27039066 to 27039077 11 + TSS region transcription start site region 124723
Tssr124724 14 27067388 to 27067401 13 + TSS region transcription start site region 124724
Tssr124725 14 27091772 to 27091776 4 + TSS region transcription start site region 124725
Cpgi6253 14 27114525 to 27115459 934 CpG island CpG island 6253
Tssr124726 14 27114847 to 27114894 47 + TSS region transcription start site region 124726
Tssr124727 14 27114895 to 27114909 14 + TSS region transcription start site region 124727
Arhgef3 14 27114899 to 27403911 289012 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 3
Tssr124728 14 27115158 to 27115201 43 + TSS region transcription start site region 124728