Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:25494866-25854876

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zmiz1 14 25459185 to 25666743 207558 + protein coding gene zinc finger, MIZ-type containing 1
Tssr127761 14 25517290 to 25517301 11 - TSS region transcription start site region 127761
Tssr127762 14 25517351 to 25517362 11 - TSS region transcription start site region 127762
Tssr124612 14 25517504 to 25517524 20 + TSS region transcription start site region 124612
Tssr124613 14 25529811 to 25529822 11 + TSS region transcription start site region 124613
Tssr124614 14 25529872 to 25529885 13 + TSS region transcription start site region 124614
Tssr124615 14 25529892 to 25529916 24 + TSS region transcription start site region 124615
D14Mit209 14 25531626 to 25531746 120 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 209
Mir3075 14 25534439 to 25534523 84 + miRNA gene microRNA 3075
D030041H20Rik 14 25548389 to 25554399 6010 unclassified non-coding RNA gene RIKEN cDNA D030041H20 gene
Gm26772 14 25548390 to 25554369 5979 - lincRNA gene predicted gene, 26772
Tssr124616 14 25564269 to 25564296 27 + TSS region transcription start site region 124616
Tssr124617 14 25576138 to 25576152 14 + TSS region transcription start site region 124617
Tssr124618 14 25581592 to 25581618 26 + TSS region transcription start site region 124618
Tssr124619 14 25586542 to 25586559 17 + TSS region transcription start site region 124619
4931406H21Rik 14 25586804 to 25590661 3857 + lncRNA gene RIKEN cDNA 4931406H21 gene
Tssr127763 14 25587443 to 25587476 33 - TSS region transcription start site region 127763
Tssr127764 14 25587668 to 25587680 12 - TSS region transcription start site region 127764
Tssr124620 14 25588495 to 25588530 35 + TSS region transcription start site region 124620
Gm32497 14 25588737 to 25602941 14204 - lncRNA gene predicted gene, 32497
Tssr127765 14 25593931 to 25593943 12 - TSS region transcription start site region 127765
Tssr127766 14 25593961 to 25593981 20 - TSS region transcription start site region 127766
Tssr124621 14 25597609 to 25597612 3 + TSS region transcription start site region 124621
Gm45915 14 25603513 to 25605636 2123 + protein coding gene predicted gene, 45915
Cpgi6242 14 25606702 to 25608659 1957 CpG island CpG island 6242
Tssr124622 14 25607311 to 25607349 38 + TSS region transcription start site region 124622
Tssr124623 14 25607351 to 25607365 14 + TSS region transcription start site region 124623
Tssr124624 14 25607407 to 25607441 34 + TSS region transcription start site region 124624
Tssr124625 14 25607594 to 25607605 11 + TSS region transcription start site region 124625
Tssr124626 14 25607618 to 25607656 38 + TSS region transcription start site region 124626
Tssr124627 14 25607755 to 25607794 39 + TSS region transcription start site region 124627
Tssr124628 14 25607797 to 25607810 13 + TSS region transcription start site region 124628
Tssr124629 14 25607833 to 25607846 13 + TSS region transcription start site region 124629
Tssr124630 14 25607890 to 25607933 43 + TSS region transcription start site region 124630
Tssr124631 14 25607941 to 25607953 12 + TSS region transcription start site region 124631
Tssr124632 14 25635934 to 25635961 27 + TSS region transcription start site region 124632
Tssr124633 14 25642511 to 25642553 42 + TSS region transcription start site region 124633
Tssr124634 14 25644715 to 25644753 38 + TSS region transcription start site region 124634
Tssr124635 14 25649720 to 25649763 43 + TSS region transcription start site region 124635
Tssr124636 14 25650511 to 25650520 9 + TSS region transcription start site region 124636
Tssr124637 14 25656915 to 25656933 18 + TSS region transcription start site region 124637
Tssr124638 14 25661405 to 25661435 30 + TSS region transcription start site region 124638
Tssr124639 14 25663229 to 25663245 16 + TSS region transcription start site region 124639
Tssr124640 14 25663895 to 25663912 17 + TSS region transcription start site region 124640
Tssr124641 14 25664374 to 25664399 25 + TSS region transcription start site region 124641
Tssr124642 14 25665932 to 25665950 18 + TSS region transcription start site region 124642
Tssr124643 14 25666189 to 25666210 21 + TSS region transcription start site region 124643
Tssr124644 14 25674866 to 25674876 10 + TSS region transcription start site region 124644
Tssr127767 14 25687762 to 25687773 11 - TSS region transcription start site region 127767
Cpgi6243 14 25693646 to 25694810 1164 CpG island CpG island 6243
Tssr124645 14 25694147 to 25694166 19 + TSS region transcription start site region 124645
Ppif 14 25694154 to 25700468 6314 + protein coding gene peptidylprolyl isomerase F (cyclophilin F)
Tssr124646 14 25694170 to 25694233 63 + TSS region transcription start site region 124646
Ppifos 14 25696974 to 25701282 4308 - antisense lncRNA gene peptidylprolyl isomerase F, opposite strand
1700054O19Rik 14 25706406 to 25707273 867 - unclassified gene RIKEN cDNA 1700054O19 gene
Tssr124647 14 25707364 to 25707399 35 + TSS region transcription start site region 124647
Zcchc24 14 25711640 to 25768856 57216 - protein coding gene zinc finger, CCHC domain containing 24
Tssr124648 14 25751343 to 25751382 39 + TSS region transcription start site region 124648
Tssr124649 14 25751412 to 25751424 12 + TSS region transcription start site region 124649
Cpgi6244 14 25768276 to 25769544 1268 CpG island CpG island 6244
Tssr127768 14 25768792 to 25768802 10 - TSS region transcription start site region 127768
Tssr127769 14 25768810 to 25768865 55 - TSS region transcription start site region 127769
Tssr127770 14 25769033 to 25769083 50 - TSS region transcription start site region 127770
Gm27185 14 25809635 to 25809881 246 - pseudogene predicted gene 27185
Gm23701 14 25827996 to 25828105 109 - miRNA gene predicted gene, 23701
Tssr124650 14 25840149 to 25840166 17 + TSS region transcription start site region 124650
Tssr124651 14 25841873 to 25841882 9 + TSS region transcription start site region 124651
Cpgi6245 14 25841978 to 25842792 814 CpG island CpG island 6245
Tssr124652 14 25842128 to 25842139 11 + TSS region transcription start site region 124652
Tssr124653 14 25842146 to 25842170 24 + TSS region transcription start site region 124653
Anxa11 14 25842156 to 25886804 44648 + protein coding gene annexin A11
Tssr124654 14 25842174 to 25842193 19 + TSS region transcription start site region 124654
Tssr124655 14 25842201 to 25842222 21 + TSS region transcription start site region 124655
Tssr124656 14 25842223 to 25842234 11 + TSS region transcription start site region 124656
Tssr124657 14 25842238 to 25842249 11 + TSS region transcription start site region 124657
Tssr124658 14 25842583 to 25842626 43 + TSS region transcription start site region 124658
Tssr127771 14 25848337 to 25848348 11 - TSS region transcription start site region 127771
Tssr127772 14 25850546 to 25850593 47 - TSS region transcription start site region 127772
Tssr124659 14 25850663 to 25850671 8 + TSS region transcription start site region 124659
Tssr124660 14 25854333 to 25854364 31 + TSS region transcription start site region 124660