Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:24479414-25343440

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Polr3a 14 24448696 to 24487058 38362 - protein coding gene polymerase (RNA) III (DNA directed) polypeptide A
Cpgi6236 14 24486590 to 24487238 648 CpG island CpG island 6236
Tssr127750 14 24486966 to 24486976 10 - TSS region transcription start site region 127750
Tssr127751 14 24486994 to 24487064 70 - TSS region transcription start site region 127751
Tssr124589 14 24487055 to 24487088 33 + TSS region transcription start site region 124589
Cpgi6237 14 24490411 to 24491327 916 CpG island CpG island 6237
Rps24 14 24490633 to 24496146 5513 + protein coding gene ribosomal protein S24
Tssr124590 14 24490678 to 24490689 11 + TSS region transcription start site region 124590
Tssr124591 14 24490709 to 24490725 16 + TSS region transcription start site region 124591
Tssr124592 14 24490749 to 24490756 7 + TSS region transcription start site region 124592
Tssr127752 14 24491751 to 24491756 5 - TSS region transcription start site region 127752
Tssr124593 14 24492828 to 24492832 4 + TSS region transcription start site region 124593
Gm31720 14 24518027 to 24527097 9070 - lncRNA gene predicted gene, 31720
4930542C16Rik 14 24597266 to 24617467 20201 - lincRNA gene RIKEN cDNA 4930542C16 gene
9430052A13Rik 14 24605434 to 24606588 1154 unclassified gene RIKEN cDNA 9430052A13 gene
Tssr127753 14 24617483 to 24617492 9 - TSS region transcription start site region 127753
4931403M11Rik 14 24617555 to 24631373 13818 + lincRNA gene RIKEN cDNA 4931403M11 gene
4930428N03Rik 14 24621028 to 24622869 1841 + lincRNA gene RIKEN cDNA 4930428N03 gene
Tssr124594 14 24622132 to 24622143 11 + TSS region transcription start site region 124594
Tssr124595 14 24622151 to 24622158 7 + TSS region transcription start site region 124595
Gm31775 14 24665189 to 24772703 107514 + lncRNA gene predicted gene, 31775
Cpgi6238 14 24779009 to 24779691 682 CpG island CpG island 6238
Gm31838 14 24781078 to 24814312 33234 + lncRNA gene predicted gene, 31838
Gm32008 14 24817855 to 24875381 57526 + lncRNA gene predicted gene, 32008
Gm31951 14 24829064 to 24830336 1272 - lncRNA gene predicted gene, 31951
Gm47906 14 24833635 to 24835089 1454 + lincRNA gene predicted gene, 47906
Gm41110 14 24878062 to 24890922 12860 - lncRNA gene predicted gene, 41110
Gm10398 14 24909414 to 24913440 4026 + lincRNA gene predicted gene 10398
Modor2 14 24925824 to 57942312 33016488 QTL modifier of ocular retardation 2
D14Mit253 14 24925824 to 24925942 118 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 253
Gm32068 14 24950377 to 24968194 17817 + lncRNA gene predicted gene, 32068
Gm41111 14 24975846 to 24982683 6837 - lncRNA gene predicted gene, 41111
Tssr4344 14 25011597 to 25011598 1 + TSS region transcription start site region 4344
Gm47907 14 25031097 to 25031669 572 + unclassified gene predicted gene, 47907
Tssr127754 14 25032747 to 25032749 2 - TSS region transcription start site region 127754
Gm41112 14 25050685 to 25072953 22268 + lncRNA gene predicted gene, 41112
Gm38408 14 25066904 to 25074444 7540 - lincRNA gene predicted gene, 38408
Gm47909 14 25089939 to 25090406 467 - pseudogene predicted gene, 47909
Gm32123 14 25109384 to 25112926 3542 + lincRNA gene predicted gene, 32123
Gm32224 14 25127788 to 25135852 8064 + lincRNA gene predicted gene, 32224
4930572O13Rik 14 25139795 to 25143241 3446 - lincRNA gene RIKEN cDNA 4930572O13 gene
Tssr127755 14 25143239 to 25143261 22 - TSS region transcription start site region 127755
A930006J02Rik 14 25143367 to 48778390 23635023 unclassified non-coding RNA gene RIKEN cDNA A930006J02 gene
Tssr124596 14 25178804 to 25178805 1 + TSS region transcription start site region 124596
Gm32307 14 25185486 to 25201157 15671 - lncRNA gene predicted gene, 32307
Gm32379 14 25201583 to 25211653 10070 - lncRNA gene predicted gene, 32379
Zmiz1os1 14 25257523 to 25461128 203605 - antisense lncRNA gene Zmiz1 opposite strand 1
Tssr124597 14 25298365 to 25298367 2 + TSS region transcription start site region 124597
Gm26660 14 25315873 to 25379609 63736 - lincRNA gene predicted gene, 26660
Cpgi6239 14 25317790 to 25318679 889 CpG island CpG island 6239