Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:24187555-25061373

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dlg5 14 24133953 to 24245920 111967 - protein coding gene discs large MAGUK scaffold protein 5
Cpgi6233 14 24190332 to 24190494 162 CpG island CpG island 6233
Tssr124587 14 24216265 to 24216268 3 + TSS region transcription start site region 124587
Gm17105 14 24238172 to 24243391 5219 - sense intronic lncRNA gene predicted gene 17105
Cpgi6234 14 24244647 to 24246093 1446 CpG island CpG island 6234
Tssr127743 14 24245654 to 24245693 39 - TSS region transcription start site region 127743
Tssr127744 14 24245913 to 24245925 12 - TSS region transcription start site region 127744
Gm19034 14 24284926 to 24286273 1347 + pseudogene predicted gene, 19034
E330034G19Rik 14 24293214 to 24309966 16752 + protein coding gene RIKEN cDNA E330034G19 gene
Tssr124588 14 24293452 to 24293463 11 + TSS region transcription start site region 124588
Cpgi6235 14 24358342 to 24358515 173 CpG island CpG island 6235
Gm18276 14 24358359 to 24358951 592 + pseudogene predicted gene, 18276
Tssr127745 14 24369420 to 24369425 5 - TSS region transcription start site region 127745
Tssr127746 14 24369781 to 24369793 12 - TSS region transcription start site region 127746
Tssr127747 14 24369801 to 24369808 7 - TSS region transcription start site region 127747
Tssr127748 14 24369813 to 24369819 6 - TSS region transcription start site region 127748
Gm47774 14 24375653 to 24377252 1599 - lincRNA gene predicted gene, 47774
Gm41108 14 24390017 to 24391714 1697 + lncRNA gene predicted gene, 41108
Gm41109 14 24425164 to 24429822 4658 - lncRNA gene predicted gene, 41109
Tssr127749 14 24429816 to 24429830 14 - TSS region transcription start site region 127749
Gm47814 14 24438987 to 24446403 7416 - lincRNA gene predicted gene, 47814
Tssr4343 14 24446457 to 24446463 6 - TSS region transcription start site region 4343
4933428L12Rik 14 24446554 to 24447927 1373 unclassified gene RIKEN cDNA 4933428L12 gene
Polr3a 14 24448696 to 24487058 38362 - protein coding gene polymerase (RNA) III (DNA directed) polypeptide A
Cpgi6236 14 24486590 to 24487238 648 CpG island CpG island 6236
Tssr127750 14 24486966 to 24486976 10 - TSS region transcription start site region 127750
Tssr127751 14 24486994 to 24487064 70 - TSS region transcription start site region 127751
Tssr124589 14 24487055 to 24487088 33 + TSS region transcription start site region 124589
Cpgi6237 14 24490411 to 24491327 916 CpG island CpG island 6237
Rps24 14 24490633 to 24496146 5513 + protein coding gene ribosomal protein S24
Tssr124590 14 24490678 to 24490689 11 + TSS region transcription start site region 124590
Tssr124591 14 24490709 to 24490725 16 + TSS region transcription start site region 124591
Tssr124592 14 24490749 to 24490756 7 + TSS region transcription start site region 124592
Tssr127752 14 24491751 to 24491756 5 - TSS region transcription start site region 127752
Tssr124593 14 24492828 to 24492832 4 + TSS region transcription start site region 124593
Gm31720 14 24518027 to 24527097 9070 - lncRNA gene predicted gene, 31720
4930542C16Rik 14 24597266 to 24617467 20201 - lincRNA gene RIKEN cDNA 4930542C16 gene
9430052A13Rik 14 24605434 to 24606588 1154 unclassified gene RIKEN cDNA 9430052A13 gene
Tssr127753 14 24617483 to 24617492 9 - TSS region transcription start site region 127753
4931403M11Rik 14 24617555 to 24631373 13818 + lincRNA gene RIKEN cDNA 4931403M11 gene
4930428N03Rik 14 24621028 to 24622869 1841 + lincRNA gene RIKEN cDNA 4930428N03 gene
Tssr124594 14 24622132 to 24622143 11 + TSS region transcription start site region 124594
Tssr124595 14 24622151 to 24622158 7 + TSS region transcription start site region 124595
Gm31775 14 24665189 to 24772703 107514 + lncRNA gene predicted gene, 31775
Cpgi6238 14 24779009 to 24779691 682 CpG island CpG island 6238
Gm31838 14 24781078 to 24814312 33234 + lncRNA gene predicted gene, 31838
Gm32008 14 24817855 to 24875381 57526 + lncRNA gene predicted gene, 32008
Gm31951 14 24829064 to 24830336 1272 - lncRNA gene predicted gene, 31951
Gm47906 14 24833635 to 24835089 1454 + lincRNA gene predicted gene, 47906
Gm41110 14 24878062 to 24890922 12860 - lncRNA gene predicted gene, 41110
Gm10398 14 24909414 to 24913440 4026 + lincRNA gene predicted gene 10398
Modor2 14 24925824 to 57942312 33016488 QTL modifier of ocular retardation 2
D14Mit253 14 24925824 to 24925942 118 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 253
Gm32068 14 24950377 to 24968194 17817 + lncRNA gene predicted gene, 32068
Gm41111 14 24975846 to 24982683 6837 - lncRNA gene predicted gene, 41111
Tssr4344 14 25011597 to 25011598 1 + TSS region transcription start site region 4344
Gm47907 14 25031097 to 25031669 572 + unclassified gene predicted gene, 47907
Tssr127754 14 25032747 to 25032749 2 - TSS region transcription start site region 127754
Gm41112 14 25050685 to 25072953 22268 + lncRNA gene predicted gene, 41112