Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:23052291-24244952

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrmda 14 22019712 to 23056085 1036373 + protein coding gene leucine rich melanocyte differentiation associated
Gm10248 14 23038194 to 23094571 56377 - antisense lncRNA gene predicted gene 10248
Tssr124570 14 23149843 to 23149873 30 + TSS region transcription start site region 124570
D14Mit119 14 23162401 to 23162541 140 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 119
Kcnma1 14 23292291 to 24004952 712661 - protein coding gene potassium large conductance calcium-activated channel, subfamily M, alpha member 1
Tssr127713 14 23298788 to 23298793 5 - TSS region transcription start site region 127713
Tssr127714 14 23308878 to 23308883 5 - TSS region transcription start site region 127714
Gm46443 14 23321144 to 23321507 363 + pseudogene predicted gene, 46443
Tssr4342 14 23384436 to 23384443 7 + TSS region transcription start site region 4342
D14Mit208 14 23421868 to 23421992 124 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 208
Tssr124571 14 23432475 to 23432485 10 + TSS region transcription start site region 124571
Tssr124572 14 23432495 to 23432509 14 + TSS region transcription start site region 124572
Tssr127715 14 23464122 to 23464134 12 - TSS region transcription start site region 127715
D14Mit221 14 23491217 to 23491327 110 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 221
5430425E15Rik 14 23519662 to 23520844 1182 + lncRNA gene RIKEN cDNA 5430425E15 gene
Tssr127716 14 23524781 to 23524784 3 - TSS region transcription start site region 127716
Tssr127717 14 23554756 to 23554769 13 - TSS region transcription start site region 127717
Tssr127718 14 23554812 to 23554823 11 - TSS region transcription start site region 127718
Gm29626 14 23560248 to 23564589 4341 + antisense lncRNA gene predicted gene 29626
Tssr127719 14 23589830 to 23589834 4 - TSS region transcription start site region 127719
Tssr127720 14 23641712 to 23641735 23 - TSS region transcription start site region 127720
Tssr127721 14 23729387 to 23729394 7 - TSS region transcription start site region 127721
Tssr127722 14 23835541 to 23835567 26 - TSS region transcription start site region 127722
Tssr127723 14 23835846 to 23835855 9 - TSS region transcription start site region 127723
Tssr127724 14 23962219 to 23962222 3 - TSS region transcription start site region 127724
Tssr127725 14 23967112 to 23967115 3 - TSS region transcription start site region 127725
Tssr127726 14 23967148 to 23967160 12 - TSS region transcription start site region 127726
D14Mit222 14 23974070 to 23974186 116 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 222
Tssr127727 14 23989382 to 23989386 4 - TSS region transcription start site region 127727
Cpgi6232 14 24003350 to 24005462 2112 CpG island CpG island 6232
Tssr127728 14 24003926 to 24003984 58 - TSS region transcription start site region 127728
Tssr127729 14 24004118 to 24004144 26 - TSS region transcription start site region 127729
Tssr127730 14 24004207 to 24004258 51 - TSS region transcription start site region 127730
Tssr127731 14 24004284 to 24004300 16 - TSS region transcription start site region 127731
Tssr127732 14 24004487 to 24004530 43 - TSS region transcription start site region 127732
Tssr127733 14 24004876 to 24004906 30 - TSS region transcription start site region 127733
Tssr127734 14 24004952 to 24004980 28 - TSS region transcription start site region 127734
4930519K11Rik 14 24004991 to 24005837 846 + bidirectional promoter lncRNA gene RIKEN cDNA 4930519K11 gene
Gm46444 14 24011055 to 24019327 8272 - lncRNA gene predicted gene, 46444
Gm31392 14 24044637 to 24067117 22480 - lincRNA gene predicted gene, 31392
Gm6158 14 24069734 to 24070637 903 + pseudogene predicted gene 6158
Tssr124573 14 24069752 to 24069754 2 + TSS region transcription start site region 124573
Gm31250 14 24073384 to 24073852 468 - lncRNA gene predicted gene, 31250
Tssr127735 14 24081947 to 24081959 12 - TSS region transcription start site region 127735
Tssr127736 14 24081961 to 24081981 20 - TSS region transcription start site region 127736
Tssr127737 14 24081985 to 24081988 3 - TSS region transcription start site region 127737
Tssr127738 14 24081998 to 24082009 11 - TSS region transcription start site region 127738
Tssr127739 14 24082016 to 24082024 8 - TSS region transcription start site region 127739
Tssr124574 14 24082077 to 24082083 6 + TSS region transcription start site region 124574
Tssr124575 14 24082105 to 24082121 16 + TSS region transcription start site region 124575
Tssr124576 14 24082132 to 24082152 20 + TSS region transcription start site region 124576
Mir7210 14 24088877 to 24088930 53 + miRNA gene microRNA 7210
Tssr124577 14 24099570 to 24099603 33 + TSS region transcription start site region 124577
Tssr124578 14 24100163 to 24100174 11 + TSS region transcription start site region 124578
Tssr124579 14 24100286 to 24100293 7 + TSS region transcription start site region 124579
Tssr124580 14 24104177 to 24104193 16 + TSS region transcription start site region 124580
Tssr124581 14 24108819 to 24108821 2 + TSS region transcription start site region 124581
Tssr124582 14 24118764 to 24118768 4 + TSS region transcription start site region 124582
Tssr124583 14 24118861 to 24118870 9 + TSS region transcription start site region 124583
Tssr124584 14 24118927 to 24118965 38 + TSS region transcription start site region 124584
Tssr124585 14 24118993 to 24119000 7 + TSS region transcription start site region 124585
Tssr124586 14 24119027 to 24119032 5 + TSS region transcription start site region 124586
1700067A10Rik 14 24119685 to 24120255 570 unclassified gene RIKEN cDNA 1700067A10 gene
Dlg5 14 24133953 to 24245920 111967 - protein coding gene discs large MAGUK scaffold protein 5
Gm49098 14 24170160 to 24170986 826 - unclassified gene predicted gene, 49098
Tssr127740 14 24176666 to 24176667 1 - TSS region transcription start site region 127740
Tssr127741 14 24176688 to 24176699 11 - TSS region transcription start site region 127741
Tssr127742 14 24176723 to 24176729 6 - TSS region transcription start site region 127742
Cpgi6233 14 24190332 to 24190494 162 CpG island CpG island 6233
Tssr124587 14 24216265 to 24216268 3 + TSS region transcription start site region 124587
Gm17105 14 24238172 to 24243391 5219 - sense intronic lncRNA gene predicted gene 17105
Cpgi6234 14 24244647 to 24246093 1446 CpG island CpG island 6234