Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:21800000-28738000

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712 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mcsq2 14 21810000 to 28728000 6918000 QTL methacholine sensitivity QTL 2, baseline
Gm23502 14 21812711 to 21812855 144 + snRNA gene predicted gene, 23502
Cpgi6221 14 21830921 to 21832144 1223 CpG island CpG island 6221
Tssr127690 14 21831123 to 21831129 6 - TSS region transcription start site region 127690
Tssr124454 14 21831519 to 21831530 11 + TSS region transcription start site region 124454
Tssr124455 14 21831531 to 21831574 43 + TSS region transcription start site region 124455
Vdac2 14 21831561 to 21845879 14318 + protein coding gene voltage-dependent anion channel 2
Tssr124456 14 21831842 to 21831870 28 + TSS region transcription start site region 124456
Tssr124457 14 21832882 to 21832918 36 + TSS region transcription start site region 124457
Tssr124458 14 21838425 to 21838437 12 + TSS region transcription start site region 124458
Tssr127691 14 21845514 to 21845522 8 - TSS region transcription start site region 127691
Comtd1 14 21845861 to 21848910 3049 - protein coding gene catechol-O-methyltransferase domain containing 1
Cpgi6222 14 21847238 to 21849169 1931 CpG island CpG island 6222
A430057M04Rik 14 21847578 to 21856931 9353 + antisense lncRNA gene RIKEN cDNA A430057M04 gene
Tssr127692 14 21848280 to 21848296 16 - TSS region transcription start site region 127692
Tssr124459 14 21848444 to 21848456 12 + TSS region transcription start site region 124459
Tssr124460 14 21848466 to 21848487 21 + TSS region transcription start site region 124460
Tssr124461 14 21848510 to 21848545 35 + TSS region transcription start site region 124461
Tssr127693 14 21848842 to 21848852 10 - TSS region transcription start site region 127693
Tssr127694 14 21848878 to 21848921 43 - TSS region transcription start site region 127694
Tssr127695 14 21848924 to 21848938 14 - TSS region transcription start site region 127695
Tssr4340 14 21857030 to 21857031 1 + TSS region transcription start site region 4340
4931407E12Rik 14 21868630 to 21889766 21136 - lincRNA gene RIKEN cDNA 4931407E12 gene
D14Mit126 14 21873066 to 21873205 139 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 126
Tssr127696 14 21889763 to 21889791 28 - TSS region transcription start site region 127696
Tssr127697 14 21889814 to 21889819 5 - TSS region transcription start site region 127697
D14Mit2 14 21897484 to 21897620 136 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 2
D14Mit148 14 21906608 to 21906736 128 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 148
Gm37590 14 21932095 to 21952399 20304 + unclassified gene predicted gene, 37590
Cpgi6223 14 21981486 to 21981843 357 CpG island CpG island 6223
Cpgi6224 14 21982588 to 21983269 681 CpG island CpG island 6224
Zfp503 14 21983962 to 21989601 5639 - protein coding gene zinc finger protein 503
Cpgi6225 14 21984708 to 21986686 1978 CpG island CpG island 6225
Tssr127698 14 21985653 to 21985657 4 - TSS region transcription start site region 127698
Cpgi6226 14 21987084 to 21988573 1489 CpG island CpG island 6226
Tssr127699 14 21987493 to 21987509 16 - TSS region transcription start site region 127699
Tssr127700 14 21987556 to 21987573 17 - TSS region transcription start site region 127700
Tssr127701 14 21987861 to 21987882 21 - TSS region transcription start site region 127701
Tssr127702 14 21987885 to 21987897 12 - TSS region transcription start site region 127702
Tssr127703 14 21987994 to 21988009 15 - TSS region transcription start site region 127703
Tssr127704 14 21988414 to 21988436 22 - TSS region transcription start site region 127704
Cpgi6227 14 21988919 to 21989993 1074 CpG island CpG island 6227
Tssr127705 14 21989475 to 21989493 18 - TSS region transcription start site region 127705
A330001L22Rik 14 21989744 to 21991133 1389 unclassified non-coding RNA gene RIKEN cDNA A330001L22 gene
Tssr124462 14 21989932 to 21989970 38 + TSS region transcription start site region 124462
Cpgi6228 14 21990612 to 21991023 411 CpG island CpG island 6228
C130012C08Rik 14 21992436 to 21996100 3664 + lncRNA gene RIKEN cDNA C130012C08 gene
Cpgi6229 14 21994194 to 21994423 229 CpG island CpG island 6229
Cpgi6230 14 21994836 to 21995719 883 CpG island CpG island 6230
Tssr124463 14 21995753 to 21995766 13 + TSS region transcription start site region 124463
Tssr127706 14 22013156 to 22013186 30 - TSS region transcription start site region 127706
Gm41106 14 22013778 to 22018805 5027 + lncRNA gene predicted gene, 41106
Cpgi6231 14 22019488 to 22020030 542 CpG island CpG island 6231
Tssr4341 14 22019641 to 22019644 3 + TSS region transcription start site region 4341
Lrmda 14 22019712 to 23056085 1036373 + protein coding gene leucine rich melanocyte differentiation associated
Tssr124464 14 22019791 to 22019808 17 + TSS region transcription start site region 124464
Tssr124465 14 22019809 to 22019832 23 + TSS region transcription start site region 124465
Tssr124466 14 22019833 to 22019856 23 + TSS region transcription start site region 124466
Gm27532 14 22021958 to 22022070 112 - miRNA gene predicted gene, 27532
Tssr124467 14 22022706 to 22022710 4 + TSS region transcription start site region 124467
Gm41107 14 22031238 to 22060757 29519 + lncRNA gene predicted gene, 41107
Tssr124468 14 22031963 to 22031974 11 + TSS region transcription start site region 124468
Gm7480 14 22032086 to 22036103 4017 - antisense lncRNA gene predicted gene 7480
Tssr124469 14 22032189 to 22032229 40 + TSS region transcription start site region 124469
Tssr124470 14 22064050 to 22064074 24 + TSS region transcription start site region 124470
Tssr124471 14 22079793 to 22079821 28 + TSS region transcription start site region 124471
Tssr124472 14 22079847 to 22079876 29 + TSS region transcription start site region 124472
Tssr124473 14 22091199 to 22091206 7 + TSS region transcription start site region 124473
Dbm3 14 22093405 to 22093528 123 QTL diabetes modifier 3
D14Mit207 14 22093405 to 22093528 123 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 207
Tssr124474 14 22100646 to 22100659 13 + TSS region transcription start site region 124474
Tssr124475 14 22100752 to 22100763 11 + TSS region transcription start site region 124475
Tssr124476 14 22100936 to 22100957 21 + TSS region transcription start site region 124476
Tssr124477 14 22113446 to 22113454 8 + TSS region transcription start site region 124477
Tssr124478 14 22114328 to 22114330 2 + TSS region transcription start site region 124478
Tssr124479 14 22120434 to 22120445 11 + TSS region transcription start site region 124479
Tssr124480 14 22122163 to 22122174 11 + TSS region transcription start site region 124480
Tssr124481 14 22122433 to 22122453 20 + TSS region transcription start site region 124481
Tssr124482 14 22122838 to 22122852 14 + TSS region transcription start site region 124482
Tssr124483 14 22123228 to 22123240 12 + TSS region transcription start site region 124483
Tssr124484 14 22123301 to 22123320 19 + TSS region transcription start site region 124484
Tssr124485 14 22123777 to 22123791 14 + TSS region transcription start site region 124485
Tssr124486 14 22123873 to 22123890 17 + TSS region transcription start site region 124486
Tssr124487 14 22135727 to 22135729 2 + TSS region transcription start site region 124487
Tssr124488 14 22140170 to 22140183 13 + TSS region transcription start site region 124488
Tssr124489 14 22140257 to 22140285 28 + TSS region transcription start site region 124489
Tssr124490 14 22140333 to 22140344 11 + TSS region transcription start site region 124490
Tssr124491 14 22140861 to 22140884 23 + TSS region transcription start site region 124491
Tssr124492 14 22141503 to 22141548 45 + TSS region transcription start site region 124492
Tssr124493 14 22143126 to 22143138 12 + TSS region transcription start site region 124493
Tssr124494 14 22158726 to 22158763 37 + TSS region transcription start site region 124494
Tssr124495 14 22159083 to 22159095 12 + TSS region transcription start site region 124495
Tssr124496 14 22159107 to 22159121 14 + TSS region transcription start site region 124496
Tssr124497 14 22163456 to 22163478 22 + TSS region transcription start site region 124497
Tssr124498 14 22164099 to 22164128 29 + TSS region transcription start site region 124498
Tssr124499 14 22164905 to 22164930 25 + TSS region transcription start site region 124499
Tssr124500 14 22164934 to 22164953 19 + TSS region transcription start site region 124500
Tssr124501 14 22164971 to 22165003 32 + TSS region transcription start site region 124501
Tssr124502 14 22178933 to 22178939 6 + TSS region transcription start site region 124502
Tssr124503 14 22180336 to 22180341 5 + TSS region transcription start site region 124503
Tssr124504 14 22181695 to 22181697 2 + TSS region transcription start site region 124504
Tssr124505 14 22184485 to 22184508 23 + TSS region transcription start site region 124505
Tssr124506 14 22185125 to 22185133 8 + TSS region transcription start site region 124506
Tssr124507 14 22185945 to 22185952 7 + TSS region transcription start site region 124507
Tssr124508 14 22186561 to 22186568 7 + TSS region transcription start site region 124508
Tssr124509 14 22195865 to 22195881 16 + TSS region transcription start site region 124509
Tssr124510 14 22201926 to 22201937 11 + TSS region transcription start site region 124510
Tssr124511 14 22202192 to 22202208 16 + TSS region transcription start site region 124511
Tssr124512 14 22202210 to 22202224 14 + TSS region transcription start site region 124512
Tssr124513 14 22203205 to 22203208 3 + TSS region transcription start site region 124513
Tssr124514 14 22212482 to 22212530 48 + TSS region transcription start site region 124514
Tssr124515 14 22214209 to 22214214 5 + TSS region transcription start site region 124515
Tssr124516 14 22214290 to 22214313 23 + TSS region transcription start site region 124516
Tssr124517 14 22214319 to 22214357 38 + TSS region transcription start site region 124517
Tssr124518 14 22220628 to 22220631 3 + TSS region transcription start site region 124518
Tssr124519 14 22222320 to 22222340 20 + TSS region transcription start site region 124519
Tssr124520 14 22224607 to 22224619 12 + TSS region transcription start site region 124520
Tssr124521 14 22225020 to 22225051 31 + TSS region transcription start site region 124521
Tssr124522 14 22240665 to 22240674 9 + TSS region transcription start site region 124522
Tssr124523 14 22240977 to 22240988 11 + TSS region transcription start site region 124523
Tssr124524 14 22246850 to 22246864 14 + TSS region transcription start site region 124524
Tssr124525 14 22247015 to 22247022 7 + TSS region transcription start site region 124525
Tssr124526 14 22252947 to 22252969 22 + TSS region transcription start site region 124526
Tssr124527 14 22258838 to 22258871 33 + TSS region transcription start site region 124527
Tssr124528 14 22275190 to 22275201 11 + TSS region transcription start site region 124528
Tssr124529 14 22308223 to 22308225 2 + TSS region transcription start site region 124529
Tssr124530 14 22308267 to 22308270 3 + TSS region transcription start site region 124530
Tssr124531 14 22310733 to 22310747 14 + TSS region transcription start site region 124531
Tssr124532 14 22310826 to 22310841 15 + TSS region transcription start site region 124532
Tssr124533 14 22310876 to 22310894 18 + TSS region transcription start site region 124533
Tssr124534 14 22310941 to 22310974 33 + TSS region transcription start site region 124534
Tssr124535 14 22318435 to 22318454 19 + TSS region transcription start site region 124535
Tssr124536 14 22318671 to 22318682 11 + TSS region transcription start site region 124536
Tssr124537 14 22318710 to 22318723 13 + TSS region transcription start site region 124537
Tssr124538 14 22318728 to 22318752 24 + TSS region transcription start site region 124538
Tssr124539 14 22320674 to 22320684 10 + TSS region transcription start site region 124539
Tssr124540 14 22325409 to 22325418 9 + TSS region transcription start site region 124540
Tssr124541 14 22330677 to 22330700 23 + TSS region transcription start site region 124541
Tssr124542 14 22330904 to 22330952 48 + TSS region transcription start site region 124542
Tssr124543 14 22349756 to 22349777 21 + TSS region transcription start site region 124543
Tssr124544 14 22350621 to 22350632 11 + TSS region transcription start site region 124544
Tssr124545 14 22365134 to 22365145 11 + TSS region transcription start site region 124545
Tssr124546 14 22365209 to 22365267 58 + TSS region transcription start site region 124546
Tssr124547 14 22365331 to 22365355 24 + TSS region transcription start site region 124547
Tssr124548 14 22369319 to 22369321 2 + TSS region transcription start site region 124548
Tssr124549 14 22371702 to 22371714 12 + TSS region transcription start site region 124549
Tssr124550 14 22371845 to 22371893 48 + TSS region transcription start site region 124550
Tssr124551 14 22371947 to 22371953 6 + TSS region transcription start site region 124551
Tssr124552 14 22378167 to 22378172 5 + TSS region transcription start site region 124552
Tssr124553 14 22394249 to 22394257 8 + TSS region transcription start site region 124553
5230400M06Rik 14 22401127 to 22402927 1800 unclassified gene RIKEN cDNA 5230400M06 gene
Tssr124554 14 22405463 to 22405466 3 + TSS region transcription start site region 124554
Tssr124555 14 22428746 to 22428756 10 + TSS region transcription start site region 124555
Tssr124556 14 22433041 to 22433054 13 + TSS region transcription start site region 124556
Tssr124557 14 22438667 to 22438678 11 + TSS region transcription start site region 124557
Tssr124558 14 22438696 to 22438711 15 + TSS region transcription start site region 124558
Tssr127707 14 22452688 to 22452699 11 - TSS region transcription start site region 127707
Tssr124559 14 22455891 to 22455896 5 + TSS region transcription start site region 124559
Tssr124560 14 22466341 to 22466363 22 + TSS region transcription start site region 124560
Tssr124561 14 22468865 to 22468890 25 + TSS region transcription start site region 124561
4930405A10Rik 14 22507174 to 22542798 35624 - antisense lncRNA gene RIKEN cDNA 4930405A10 gene
Tssr127708 14 22542790 to 22542828 38 - TSS region transcription start site region 127708
Tssr127709 14 22542843 to 22542849 6 - TSS region transcription start site region 127709
Tssr124562 14 22547353 to 22547359 6 + TSS region transcription start site region 124562
Gm5670 14 22558082 to 22558453 371 - pseudogene predicted gene 5670
Tssr124563 14 22616377 to 22616395 18 + TSS region transcription start site region 124563
Tssr127710 14 22635605 to 22635610 5 - TSS region transcription start site region 127710
Tssr124564 14 22695040 to 22695051 11 + TSS region transcription start site region 124564
Tssr124565 14 22722407 to 22722417 10 + TSS region transcription start site region 124565
Gm30926 14 22728998 to 22801875 72877 - lncRNA gene predicted gene, 30926
Tssr124566 14 22742738 to 22742743 5 + TSS region transcription start site region 124566
Tssr124567 14 22772792 to 22772795 3 + TSS region transcription start site region 124567
Gm7473 14 22775018 to 22775244 226 - pseudogene predicted gene 7473
Tssr127711 14 22780532 to 22780535 3 - TSS region transcription start site region 127711
Tssr127712 14 22801228 to 22801266 38 - TSS region transcription start site region 127712
D14Mit252 14 22811865 to 22811954 89 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 252
Tssr124568 14 22829368 to 22829374 6 + TSS region transcription start site region 124568
Gm18145 14 22876014 to 22876535 521 + pseudogene predicted gene, 18145
Gm30783 14 22921122 to 22932356 11234 - lncRNA gene predicted gene, 30783
Gm47601 14 22927926 to 22933500 5574 + sense intronic lncRNA gene predicted gene, 47601
D14Mit230 14 22930301 to 22930451 150 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 230
Tssr124569 14 22937443 to 22937454 11 + TSS region transcription start site region 124569
Gm10248 14 23038194 to 23094571 56377 - antisense lncRNA gene predicted gene 10248
Tssr124570 14 23149843 to 23149873 30 + TSS region transcription start site region 124570
D14Mit119 14 23162401 to 23162541 140 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 119
Kcnma1 14 23292291 to 24004952 712661 - protein coding gene potassium large conductance calcium-activated channel, subfamily M, alpha member 1
Tssr127713 14 23298788 to 23298793 5 - TSS region transcription start site region 127713
Tssr127714 14 23308878 to 23308883 5 - TSS region transcription start site region 127714
Gm46443 14 23321144 to 23321507 363 + pseudogene predicted gene, 46443
Tssr4342 14 23384436 to 23384443 7 + TSS region transcription start site region 4342
D14Mit208 14 23421868 to 23421992 124 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 208
Tssr124571 14 23432475 to 23432485 10 + TSS region transcription start site region 124571
Tssr124572 14 23432495 to 23432509 14 + TSS region transcription start site region 124572
Tssr127715 14 23464122 to 23464134 12 - TSS region transcription start site region 127715
D14Mit221 14 23491217 to 23491327 110 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 221
5430425E15Rik 14 23519662 to 23520844 1182 + lncRNA gene RIKEN cDNA 5430425E15 gene
Tssr127716 14 23524781 to 23524784 3 - TSS region transcription start site region 127716
Tssr127717 14 23554756 to 23554769 13 - TSS region transcription start site region 127717
Tssr127718 14 23554812 to 23554823 11 - TSS region transcription start site region 127718
Gm29626 14 23560248 to 23564589 4341 + antisense lncRNA gene predicted gene 29626