Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:21789708-22181686

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104 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Samd8 14 21750531 to 21798725 48194 + protein coding gene sterile alpha motif domain containing 8
Tssr124451 14 21797794 to 21797806 12 + TSS region transcription start site region 124451
Tssr124452 14 21797809 to 21797826 17 + TSS region transcription start site region 124452
Tssr124453 14 21797973 to 21797995 22 + TSS region transcription start site region 124453
Mcsq2 14 21810000 to 28728000 6918000 QTL methacholine sensitivity QTL 2, baseline
Gm23502 14 21812711 to 21812855 144 + snRNA gene predicted gene, 23502
Cpgi6221 14 21830921 to 21832144 1223 CpG island CpG island 6221
Tssr127690 14 21831123 to 21831129 6 - TSS region transcription start site region 127690
Tssr124454 14 21831519 to 21831530 11 + TSS region transcription start site region 124454
Tssr124455 14 21831531 to 21831574 43 + TSS region transcription start site region 124455
Vdac2 14 21831561 to 21845879 14318 + protein coding gene voltage-dependent anion channel 2
Tssr124456 14 21831842 to 21831870 28 + TSS region transcription start site region 124456
Tssr124457 14 21832882 to 21832918 36 + TSS region transcription start site region 124457
Tssr124458 14 21838425 to 21838437 12 + TSS region transcription start site region 124458
Tssr127691 14 21845514 to 21845522 8 - TSS region transcription start site region 127691
Comtd1 14 21845861 to 21848910 3049 - protein coding gene catechol-O-methyltransferase domain containing 1
Cpgi6222 14 21847238 to 21849169 1931 CpG island CpG island 6222
A430057M04Rik 14 21847578 to 21856931 9353 + antisense lncRNA gene RIKEN cDNA A430057M04 gene
Tssr127692 14 21848280 to 21848296 16 - TSS region transcription start site region 127692
Tssr124459 14 21848444 to 21848456 12 + TSS region transcription start site region 124459
Tssr124460 14 21848466 to 21848487 21 + TSS region transcription start site region 124460
Tssr124461 14 21848510 to 21848545 35 + TSS region transcription start site region 124461
Tssr127693 14 21848842 to 21848852 10 - TSS region transcription start site region 127693
Tssr127694 14 21848878 to 21848921 43 - TSS region transcription start site region 127694
Tssr127695 14 21848924 to 21848938 14 - TSS region transcription start site region 127695
Tssr4340 14 21857030 to 21857031 1 + TSS region transcription start site region 4340
4931407E12Rik 14 21868630 to 21889766 21136 - lincRNA gene RIKEN cDNA 4931407E12 gene
D14Mit126 14 21873066 to 21873205 139 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 126
Tssr127696 14 21889763 to 21889791 28 - TSS region transcription start site region 127696
Tssr127697 14 21889814 to 21889819 5 - TSS region transcription start site region 127697
D14Mit2 14 21897484 to 21897620 136 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 2
D14Mit148 14 21906608 to 21906736 128 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 148
Gm37590 14 21932095 to 21952399 20304 + unclassified gene predicted gene, 37590
Cpgi6223 14 21981486 to 21981843 357 CpG island CpG island 6223
Cpgi6224 14 21982588 to 21983269 681 CpG island CpG island 6224
Zfp503 14 21983962 to 21989601 5639 - protein coding gene zinc finger protein 503
Cpgi6225 14 21984708 to 21986686 1978 CpG island CpG island 6225
Tssr127698 14 21985653 to 21985657 4 - TSS region transcription start site region 127698
Cpgi6226 14 21987084 to 21988573 1489 CpG island CpG island 6226
Tssr127699 14 21987493 to 21987509 16 - TSS region transcription start site region 127699
Tssr127700 14 21987556 to 21987573 17 - TSS region transcription start site region 127700
Tssr127701 14 21987861 to 21987882 21 - TSS region transcription start site region 127701
Tssr127702 14 21987885 to 21987897 12 - TSS region transcription start site region 127702
Tssr127703 14 21987994 to 21988009 15 - TSS region transcription start site region 127703
Tssr127704 14 21988414 to 21988436 22 - TSS region transcription start site region 127704
Cpgi6227 14 21988919 to 21989993 1074 CpG island CpG island 6227
Tssr127705 14 21989475 to 21989493 18 - TSS region transcription start site region 127705
A330001L22Rik 14 21989744 to 21991133 1389 unclassified non-coding RNA gene RIKEN cDNA A330001L22 gene
Tssr124462 14 21989932 to 21989970 38 + TSS region transcription start site region 124462
Cpgi6228 14 21990612 to 21991023 411 CpG island CpG island 6228
C130012C08Rik 14 21992436 to 21996100 3664 + lncRNA gene RIKEN cDNA C130012C08 gene
Cpgi6229 14 21994194 to 21994423 229 CpG island CpG island 6229
Cpgi6230 14 21994836 to 21995719 883 CpG island CpG island 6230
Tssr124463 14 21995753 to 21995766 13 + TSS region transcription start site region 124463
Tssr127706 14 22013156 to 22013186 30 - TSS region transcription start site region 127706
Gm41106 14 22013778 to 22018805 5027 + lncRNA gene predicted gene, 41106
Cpgi6231 14 22019488 to 22020030 542 CpG island CpG island 6231
Tssr4341 14 22019641 to 22019644 3 + TSS region transcription start site region 4341
Lrmda 14 22019712 to 23056085 1036373 + protein coding gene leucine rich melanocyte differentiation associated
Tssr124464 14 22019791 to 22019808 17 + TSS region transcription start site region 124464
Tssr124465 14 22019809 to 22019832 23 + TSS region transcription start site region 124465
Tssr124466 14 22019833 to 22019856 23 + TSS region transcription start site region 124466
Gm27532 14 22021958 to 22022070 112 - miRNA gene predicted gene, 27532
Tssr124467 14 22022706 to 22022710 4 + TSS region transcription start site region 124467
Gm41107 14 22031238 to 22060757 29519 + lncRNA gene predicted gene, 41107
Tssr124468 14 22031963 to 22031974 11 + TSS region transcription start site region 124468
Gm7480 14 22032086 to 22036103 4017 - antisense lncRNA gene predicted gene 7480
Tssr124469 14 22032189 to 22032229 40 + TSS region transcription start site region 124469
Tssr124470 14 22064050 to 22064074 24 + TSS region transcription start site region 124470
Tssr124471 14 22079793 to 22079821 28 + TSS region transcription start site region 124471
Tssr124472 14 22079847 to 22079876 29 + TSS region transcription start site region 124472
Tssr124473 14 22091199 to 22091206 7 + TSS region transcription start site region 124473
Dbm3 14 22093405 to 22093528 123 QTL diabetes modifier 3
D14Mit207 14 22093405 to 22093528 123 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 207
Tssr124474 14 22100646 to 22100659 13 + TSS region transcription start site region 124474
Tssr124475 14 22100752 to 22100763 11 + TSS region transcription start site region 124475
Tssr124476 14 22100936 to 22100957 21 + TSS region transcription start site region 124476
Tssr124477 14 22113446 to 22113454 8 + TSS region transcription start site region 124477
Tssr124478 14 22114328 to 22114330 2 + TSS region transcription start site region 124478
Tssr124479 14 22120434 to 22120445 11 + TSS region transcription start site region 124479
Tssr124480 14 22122163 to 22122174 11 + TSS region transcription start site region 124480
Tssr124481 14 22122433 to 22122453 20 + TSS region transcription start site region 124481
Tssr124482 14 22122838 to 22122852 14 + TSS region transcription start site region 124482
Tssr124483 14 22123228 to 22123240 12 + TSS region transcription start site region 124483
Tssr124484 14 22123301 to 22123320 19 + TSS region transcription start site region 124484
Tssr124485 14 22123777 to 22123791 14 + TSS region transcription start site region 124485
Tssr124486 14 22123873 to 22123890 17 + TSS region transcription start site region 124486
Tssr124487 14 22135727 to 22135729 2 + TSS region transcription start site region 124487
Tssr124488 14 22140170 to 22140183 13 + TSS region transcription start site region 124488
Tssr124489 14 22140257 to 22140285 28 + TSS region transcription start site region 124489
Tssr124490 14 22140333 to 22140344 11 + TSS region transcription start site region 124490
Tssr124491 14 22140861 to 22140884 23 + TSS region transcription start site region 124491
Tssr124492 14 22141503 to 22141548 45 + TSS region transcription start site region 124492
Tssr124493 14 22143126 to 22143138 12 + TSS region transcription start site region 124493
Tssr124494 14 22158726 to 22158763 37 + TSS region transcription start site region 124494
Tssr124495 14 22159083 to 22159095 12 + TSS region transcription start site region 124495
Tssr124496 14 22159107 to 22159121 14 + TSS region transcription start site region 124496
Tssr124497 14 22163456 to 22163478 22 + TSS region transcription start site region 124497
Tssr124498 14 22164099 to 22164128 29 + TSS region transcription start site region 124498
Tssr124499 14 22164905 to 22164930 25 + TSS region transcription start site region 124499
Tssr124500 14 22164934 to 22164953 19 + TSS region transcription start site region 124500
Tssr124501 14 22164971 to 22165003 32 + TSS region transcription start site region 124501
Tssr124502 14 22178933 to 22178939 6 + TSS region transcription start site region 124502
Tssr124503 14 22180336 to 22180341 5 + TSS region transcription start site region 124503