Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:21772578-21931931

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Samd8 14 21750531 to 21798725 48194 + protein coding gene sterile alpha motif domain containing 8
Tssr124450 14 21776766 to 21776799 33 + TSS region transcription start site region 124450
Tssr124451 14 21797794 to 21797806 12 + TSS region transcription start site region 124451
Tssr124452 14 21797809 to 21797826 17 + TSS region transcription start site region 124452
Tssr124453 14 21797973 to 21797995 22 + TSS region transcription start site region 124453
Mcsq2 14 21810000 to 28728000 6918000 QTL methacholine sensitivity QTL 2, baseline
Gm23502 14 21812711 to 21812855 144 + snRNA gene predicted gene, 23502
Cpgi6221 14 21830921 to 21832144 1223 CpG island CpG island 6221
Tssr127690 14 21831123 to 21831129 6 - TSS region transcription start site region 127690
Tssr124454 14 21831519 to 21831530 11 + TSS region transcription start site region 124454
Tssr124455 14 21831531 to 21831574 43 + TSS region transcription start site region 124455
Vdac2 14 21831561 to 21845879 14318 + protein coding gene voltage-dependent anion channel 2
Tssr124456 14 21831842 to 21831870 28 + TSS region transcription start site region 124456
Tssr124457 14 21832882 to 21832918 36 + TSS region transcription start site region 124457
Tssr124458 14 21838425 to 21838437 12 + TSS region transcription start site region 124458
Tssr127691 14 21845514 to 21845522 8 - TSS region transcription start site region 127691
Comtd1 14 21845861 to 21848910 3049 - protein coding gene catechol-O-methyltransferase domain containing 1
Cpgi6222 14 21847238 to 21849169 1931 CpG island CpG island 6222
A430057M04Rik 14 21847578 to 21856931 9353 + antisense lncRNA gene RIKEN cDNA A430057M04 gene
Tssr127692 14 21848280 to 21848296 16 - TSS region transcription start site region 127692
Tssr124459 14 21848444 to 21848456 12 + TSS region transcription start site region 124459
Tssr124460 14 21848466 to 21848487 21 + TSS region transcription start site region 124460
Tssr124461 14 21848510 to 21848545 35 + TSS region transcription start site region 124461
Tssr127693 14 21848842 to 21848852 10 - TSS region transcription start site region 127693
Tssr127694 14 21848878 to 21848921 43 - TSS region transcription start site region 127694
Tssr127695 14 21848924 to 21848938 14 - TSS region transcription start site region 127695
Tssr4340 14 21857030 to 21857031 1 + TSS region transcription start site region 4340
4931407E12Rik 14 21868630 to 21889766 21136 - lincRNA gene RIKEN cDNA 4931407E12 gene
D14Mit126 14 21873066 to 21873205 139 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 126
Tssr127696 14 21889763 to 21889791 28 - TSS region transcription start site region 127696
Tssr127697 14 21889814 to 21889819 5 - TSS region transcription start site region 127697
D14Mit2 14 21897484 to 21897620 136 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 2
D14Mit148 14 21906608 to 21906736 128 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 148