Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:21475542-22025608

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106 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr124433 14 21477287 to 21477289 2 + TSS region transcription start site region 124433
Tssr124434 14 21481428 to 21481439 11 + TSS region transcription start site region 124434
Kat6b 14 21498812 to 21672478 173666 + protein coding gene K(lysine) acetyltransferase 6B
Cpgi6218 14 21499005 to 21501524 2519 CpG island CpG island 6218
Tssr124435 14 21499221 to 21499238 17 + TSS region transcription start site region 124435
Tssr4339 14 21499730 to 21499775 45 + TSS region transcription start site region 4339
Tssr124436 14 21499831 to 21499883 52 + TSS region transcription start site region 124436
Tssr127675 14 21500283 to 21500299 16 - TSS region transcription start site region 127675
Tssr127676 14 21500376 to 21500398 22 - TSS region transcription start site region 127676
Tssr124437 14 21500879 to 21500897 18 + TSS region transcription start site region 124437
Tssr124438 14 21500927 to 21500934 7 + TSS region transcription start site region 124438
Tssr124439 14 21536714 to 21536723 9 + TSS region transcription start site region 124439
Tssr124440 14 21556000 to 21556003 3 + TSS region transcription start site region 124440
Tssr124441 14 21560955 to 21560960 5 + TSS region transcription start site region 124441
D14Ertd725e 14 21603115 to 21603346 231 DNA segment DNA segment, Chr 14, ERATO Doi 725, expressed
Tssr124442 14 21622558 to 21622562 4 + TSS region transcription start site region 124442
Tssr124443 14 21657530 to 21657571 41 + TSS region transcription start site region 124443
Dupd1 14 21676537 to 21714576 38039 - protein coding gene dual specificity phosphatase and pro isomerase domain containing 1
Cpgi6219 14 21686538 to 21687056 518 CpG island CpG island 6219
Tssr127677 14 21714550 to 21714567 17 - TSS region transcription start site region 127677
Tssr127678 14 21714570 to 21714584 14 - TSS region transcription start site region 127678
Dusp13 14 21733395 to 21748988 15593 - protein coding gene dual specificity phosphatase 13
Tssr127679 14 21740395 to 21740420 25 - TSS region transcription start site region 127679
Tssr127680 14 21740422 to 21740445 23 - TSS region transcription start site region 127680
Tssr127681 14 21741449 to 21741456 7 - TSS region transcription start site region 127681
Tssr127682 14 21741463 to 21741470 7 - TSS region transcription start site region 127682
Tssr127683 14 21741480 to 21741503 23 - TSS region transcription start site region 127683
Gm15935 14 21741543 to 21746632 5089 + antisense lncRNA gene predicted gene 15935
Tssr124444 14 21741579 to 21741593 14 + TSS region transcription start site region 124444
Tssr127684 14 21742870 to 21742893 23 - TSS region transcription start site region 127684
Tssr127685 14 21742904 to 21742908 4 - TSS region transcription start site region 127685
Tssr127686 14 21742909 to 21742918 9 - TSS region transcription start site region 127686
Tssr127687 14 21745204 to 21745235 31 - TSS region transcription start site region 127687
Tssr124445 14 21745486 to 21745512 26 + TSS region transcription start site region 124445
Tssr127688 14 21748610 to 21748650 40 - TSS region transcription start site region 127688
Cpgi6220 14 21750395 to 21751518 1123 CpG island CpG island 6220
Tssr124446 14 21750525 to 21750536 11 + TSS region transcription start site region 124446
Samd8 14 21750531 to 21798725 48194 + protein coding gene sterile alpha motif domain containing 8
Tssr124447 14 21750542 to 21750608 66 + TSS region transcription start site region 124447
Tssr124448 14 21750613 to 21750624 11 + TSS region transcription start site region 124448
Tssr127689 14 21751375 to 21751384 9 - TSS region transcription start site region 127689
Tssr124449 14 21757770 to 21757774 4 + TSS region transcription start site region 124449
Tssr124450 14 21776766 to 21776799 33 + TSS region transcription start site region 124450
Tssr124451 14 21797794 to 21797806 12 + TSS region transcription start site region 124451
Tssr124452 14 21797809 to 21797826 17 + TSS region transcription start site region 124452
Tssr124453 14 21797973 to 21797995 22 + TSS region transcription start site region 124453
Mcsq2 14 21810000 to 28728000 6918000 QTL methacholine sensitivity QTL 2, baseline
Gm23502 14 21812711 to 21812855 144 + snRNA gene predicted gene, 23502
Cpgi6221 14 21830921 to 21832144 1223 CpG island CpG island 6221
Tssr127690 14 21831123 to 21831129 6 - TSS region transcription start site region 127690
Tssr124454 14 21831519 to 21831530 11 + TSS region transcription start site region 124454
Tssr124455 14 21831531 to 21831574 43 + TSS region transcription start site region 124455
Vdac2 14 21831561 to 21845879 14318 + protein coding gene voltage-dependent anion channel 2
Tssr124456 14 21831842 to 21831870 28 + TSS region transcription start site region 124456
Tssr124457 14 21832882 to 21832918 36 + TSS region transcription start site region 124457
Tssr124458 14 21838425 to 21838437 12 + TSS region transcription start site region 124458
Tssr127691 14 21845514 to 21845522 8 - TSS region transcription start site region 127691
Comtd1 14 21845861 to 21848910 3049 - protein coding gene catechol-O-methyltransferase domain containing 1
Cpgi6222 14 21847238 to 21849169 1931 CpG island CpG island 6222
A430057M04Rik 14 21847578 to 21856931 9353 + antisense lncRNA gene RIKEN cDNA A430057M04 gene
Tssr127692 14 21848280 to 21848296 16 - TSS region transcription start site region 127692
Tssr124459 14 21848444 to 21848456 12 + TSS region transcription start site region 124459
Tssr124460 14 21848466 to 21848487 21 + TSS region transcription start site region 124460
Tssr124461 14 21848510 to 21848545 35 + TSS region transcription start site region 124461
Tssr127693 14 21848842 to 21848852 10 - TSS region transcription start site region 127693
Tssr127694 14 21848878 to 21848921 43 - TSS region transcription start site region 127694
Tssr127695 14 21848924 to 21848938 14 - TSS region transcription start site region 127695
Tssr4340 14 21857030 to 21857031 1 + TSS region transcription start site region 4340
4931407E12Rik 14 21868630 to 21889766 21136 - lincRNA gene RIKEN cDNA 4931407E12 gene
D14Mit126 14 21873066 to 21873205 139 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 126
Tssr127696 14 21889763 to 21889791 28 - TSS region transcription start site region 127696
Tssr127697 14 21889814 to 21889819 5 - TSS region transcription start site region 127697
D14Mit2 14 21897484 to 21897620 136 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 2
D14Mit148 14 21906608 to 21906736 128 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 148
Gm37590 14 21932095 to 21952399 20304 + unclassified gene predicted gene, 37590
Cpgi6223 14 21981486 to 21981843 357 CpG island CpG island 6223
Cpgi6224 14 21982588 to 21983269 681 CpG island CpG island 6224
Zfp503 14 21983962 to 21989601 5639 - protein coding gene zinc finger protein 503
Cpgi6225 14 21984708 to 21986686 1978 CpG island CpG island 6225
Tssr127698 14 21985653 to 21985657 4 - TSS region transcription start site region 127698
Cpgi6226 14 21987084 to 21988573 1489 CpG island CpG island 6226
Tssr127699 14 21987493 to 21987509 16 - TSS region transcription start site region 127699
Tssr127700 14 21987556 to 21987573 17 - TSS region transcription start site region 127700
Tssr127701 14 21987861 to 21987882 21 - TSS region transcription start site region 127701
Tssr127702 14 21987885 to 21987897 12 - TSS region transcription start site region 127702
Tssr127703 14 21987994 to 21988009 15 - TSS region transcription start site region 127703
Tssr127704 14 21988414 to 21988436 22 - TSS region transcription start site region 127704
Cpgi6227 14 21988919 to 21989993 1074 CpG island CpG island 6227
Tssr127705 14 21989475 to 21989493 18 - TSS region transcription start site region 127705
A330001L22Rik 14 21989744 to 21991133 1389 unclassified non-coding RNA gene RIKEN cDNA A330001L22 gene
Tssr124462 14 21989932 to 21989970 38 + TSS region transcription start site region 124462
Cpgi6228 14 21990612 to 21991023 411 CpG island CpG island 6228
C130012C08Rik 14 21992436 to 21996100 3664 + lncRNA gene RIKEN cDNA C130012C08 gene
Cpgi6229 14 21994194 to 21994423 229 CpG island CpG island 6229
Cpgi6230 14 21994836 to 21995719 883 CpG island CpG island 6230
Tssr124463 14 21995753 to 21995766 13 + TSS region transcription start site region 124463
Tssr127706 14 22013156 to 22013186 30 - TSS region transcription start site region 127706
Gm41106 14 22013778 to 22018805 5027 + lncRNA gene predicted gene, 41106
Cpgi6231 14 22019488 to 22020030 542 CpG island CpG island 6231
Tssr4341 14 22019641 to 22019644 3 + TSS region transcription start site region 4341
Lrmda 14 22019712 to 23056085 1036373 + protein coding gene leucine rich melanocyte differentiation associated
Tssr124464 14 22019791 to 22019808 17 + TSS region transcription start site region 124464
Tssr124465 14 22019809 to 22019832 23 + TSS region transcription start site region 124465
Tssr124466 14 22019833 to 22019856 23 + TSS region transcription start site region 124466
Gm27532 14 22021958 to 22022070 112 - miRNA gene predicted gene, 27532
Tssr124467 14 22022706 to 22022710 4 + TSS region transcription start site region 124467