Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:20959949-21963360

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130 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
sky 14 12481829 to 21012571 8530742 heritable phenotypic marker severe kyphosis
Vcl 14 20929398 to 21033676 104278 + protein coding gene vinculin
Tssr124405 14 20967256 to 20967275 19 + TSS region transcription start site region 124405
Phsq1 14 21000000 to 3000000 -18000000 QTL percent hyperactivated sperm QTL 1
Gm30274 14 21010173 to 21011394 1221 - pseudogene predicted gene, 30274
Tssr127666 14 21011339 to 21011355 16 - TSS region transcription start site region 127666
Epfpq1 14 21012382 to 71648361 50635979 QTL epididymal fat percentage QTL 1
D14Mit50 14 21012382 to 21012571 189 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 50
Tssr124406 14 21020681 to 21020698 17 + TSS region transcription start site region 124406
Tssr124407 14 21032428 to 21032441 13 + TSS region transcription start site region 124407
Tssr124408 14 21032454 to 21032465 11 + TSS region transcription start site region 124408
Tssr124409 14 21032507 to 21032522 15 + TSS region transcription start site region 124409
Ap3m1 14 21033742 to 21052535 18793 - protein coding gene adaptor-related protein complex 3, mu 1 subunit
Tssr127667 14 21038443 to 21038447 4 - TSS region transcription start site region 127667
Tssr127668 14 21047945 to 21047957 12 - TSS region transcription start site region 127668
Tssr127669 14 21049442 to 21049461 19 - TSS region transcription start site region 127669
Tssr127670 14 21050718 to 21050722 4 - TSS region transcription start site region 127670
Tssr127671 14 21051539 to 21051563 24 - TSS region transcription start site region 127671
Cpgi6216 14 21051724 to 21053068 1344 CpG island CpG island 6216
Tssr124410 14 21051834 to 21051839 5 + TSS region transcription start site region 124410
Tssr127672 14 21052177 to 21052225 48 - TSS region transcription start site region 127672
Tssr127673 14 21052420 to 21052448 28 - TSS region transcription start site region 127673
Tssr127674 14 21052452 to 21052510 58 - TSS region transcription start site region 127674
Adk 14 21052574 to 21448569 395995 + protein coding gene adenosine kinase
Tssr124411 14 21052577 to 21052589 12 + TSS region transcription start site region 124411
Tssr124412 14 21052594 to 21052633 39 + TSS region transcription start site region 124412
Cpgi6217 14 21075702 to 21076486 784 CpG island CpG island 6217
Tssr124413 14 21076136 to 21076147 11 + TSS region transcription start site region 124413
Tssr124414 14 21076169 to 21076222 53 + TSS region transcription start site region 124414
Tssr124415 14 21077021 to 21077025 4 + TSS region transcription start site region 124415
D14Mit251 14 21080979 to 21081106 127 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 251
Tssr124416 14 21104418 to 21104421 3 + TSS region transcription start site region 124416
Tssr124417 14 21111248 to 21111256 8 + TSS region transcription start site region 124417
Tssr124418 14 21179656 to 21179659 3 + TSS region transcription start site region 124418
Tssr124419 14 21182663 to 21182674 11 + TSS region transcription start site region 124419
D14Dcr16 14 21182920 to 21183015 95 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 16
Tssr124420 14 21194479 to 21194485 6 + TSS region transcription start site region 124420
Tssr124421 14 21194574 to 21194586 12 + TSS region transcription start site region 124421
B130016H12Rik 14 21204202 to 21209189 4987 unclassified gene RIKEN cDNA B130016H12 gene
Tssr124422 14 21243472 to 21243482 10 + TSS region transcription start site region 124422
Tssr124423 14 21250606 to 21250623 17 + TSS region transcription start site region 124423
Gm26372 14 21263624 to 21263859 235 + unclassified non-coding RNA gene predicted gene, 26372
A430108C13Rik 14 21270454 to 21275125 4671 unclassified gene RIKEN cDNA A430108C13 gene
Tssr124424 14 21271523 to 21271533 10 + TSS region transcription start site region 124424
Tssr124425 14 21272715 to 21272728 13 + TSS region transcription start site region 124425
Tssr4338 14 21276886 to 21276887 1 + TSS region transcription start site region 4338
Tssr124426 14 21280743 to 21280749 6 + TSS region transcription start site region 124426
Tssr124427 14 21307595 to 21307598 3 + TSS region transcription start site region 124427
Tssr124428 14 21313468 to 21313477 9 + TSS region transcription start site region 124428
Tssr124429 14 21345573 to 21345592 19 + TSS region transcription start site region 124429
Tssr124430 14 21356317 to 21356321 4 + TSS region transcription start site region 124430
Tssr124431 14 21426683 to 21426684 1 + TSS region transcription start site region 124431
Gm30363 14 21449949 to 21473360 23411 - lncRNA gene predicted gene, 30363
Gm25864 14 21450474 to 21450565 91 + snRNA gene predicted gene, 25864
Tssr124432 14 21460942 to 21460945 3 + TSS region transcription start site region 124432
Tssr124433 14 21477287 to 21477289 2 + TSS region transcription start site region 124433
Tssr124434 14 21481428 to 21481439 11 + TSS region transcription start site region 124434
Kat6b 14 21498812 to 21672478 173666 + protein coding gene K(lysine) acetyltransferase 6B
Cpgi6218 14 21499005 to 21501524 2519 CpG island CpG island 6218
Tssr124435 14 21499221 to 21499238 17 + TSS region transcription start site region 124435
Tssr4339 14 21499730 to 21499775 45 + TSS region transcription start site region 4339
Tssr124436 14 21499831 to 21499883 52 + TSS region transcription start site region 124436
Tssr127675 14 21500283 to 21500299 16 - TSS region transcription start site region 127675
Tssr127676 14 21500376 to 21500398 22 - TSS region transcription start site region 127676
Tssr124437 14 21500879 to 21500897 18 + TSS region transcription start site region 124437
Tssr124438 14 21500927 to 21500934 7 + TSS region transcription start site region 124438
Tssr124439 14 21536714 to 21536723 9 + TSS region transcription start site region 124439
Tssr124440 14 21556000 to 21556003 3 + TSS region transcription start site region 124440
Tssr124441 14 21560955 to 21560960 5 + TSS region transcription start site region 124441
D14Ertd725e 14 21603115 to 21603346 231 DNA segment DNA segment, Chr 14, ERATO Doi 725, expressed
Tssr124442 14 21622558 to 21622562 4 + TSS region transcription start site region 124442
Tssr124443 14 21657530 to 21657571 41 + TSS region transcription start site region 124443
Dupd1 14 21676537 to 21714576 38039 - protein coding gene dual specificity phosphatase and pro isomerase domain containing 1
Cpgi6219 14 21686538 to 21687056 518 CpG island CpG island 6219
Tssr127677 14 21714550 to 21714567 17 - TSS region transcription start site region 127677
Tssr127678 14 21714570 to 21714584 14 - TSS region transcription start site region 127678
Dusp13 14 21733395 to 21748988 15593 - protein coding gene dual specificity phosphatase 13
Tssr127679 14 21740395 to 21740420 25 - TSS region transcription start site region 127679
Tssr127680 14 21740422 to 21740445 23 - TSS region transcription start site region 127680
Tssr127681 14 21741449 to 21741456 7 - TSS region transcription start site region 127681
Tssr127682 14 21741463 to 21741470 7 - TSS region transcription start site region 127682
Tssr127683 14 21741480 to 21741503 23 - TSS region transcription start site region 127683
Gm15935 14 21741543 to 21746632 5089 + antisense lncRNA gene predicted gene 15935
Tssr124444 14 21741579 to 21741593 14 + TSS region transcription start site region 124444
Tssr127684 14 21742870 to 21742893 23 - TSS region transcription start site region 127684
Tssr127685 14 21742904 to 21742908 4 - TSS region transcription start site region 127685
Tssr127686 14 21742909 to 21742918 9 - TSS region transcription start site region 127686
Tssr127687 14 21745204 to 21745235 31 - TSS region transcription start site region 127687
Tssr124445 14 21745486 to 21745512 26 + TSS region transcription start site region 124445
Tssr127688 14 21748610 to 21748650 40 - TSS region transcription start site region 127688
Cpgi6220 14 21750395 to 21751518 1123 CpG island CpG island 6220
Tssr124446 14 21750525 to 21750536 11 + TSS region transcription start site region 124446
Samd8 14 21750531 to 21798725 48194 + protein coding gene sterile alpha motif domain containing 8
Tssr124447 14 21750542 to 21750608 66 + TSS region transcription start site region 124447
Tssr124448 14 21750613 to 21750624 11 + TSS region transcription start site region 124448
Tssr127689 14 21751375 to 21751384 9 - TSS region transcription start site region 127689
Tssr124449 14 21757770 to 21757774 4 + TSS region transcription start site region 124449
Tssr124450 14 21776766 to 21776799 33 + TSS region transcription start site region 124450
Tssr124451 14 21797794 to 21797806 12 + TSS region transcription start site region 124451
Tssr124452 14 21797809 to 21797826 17 + TSS region transcription start site region 124452
Tssr124453 14 21797973 to 21797995 22 + TSS region transcription start site region 124453
Mcsq2 14 21810000 to 28728000 6918000 QTL methacholine sensitivity QTL 2, baseline
Gm23502 14 21812711 to 21812855 144 + snRNA gene predicted gene, 23502
Cpgi6221 14 21830921 to 21832144 1223 CpG island CpG island 6221
Tssr127690 14 21831123 to 21831129 6 - TSS region transcription start site region 127690
Tssr124454 14 21831519 to 21831530 11 + TSS region transcription start site region 124454
Tssr124455 14 21831531 to 21831574 43 + TSS region transcription start site region 124455
Vdac2 14 21831561 to 21845879 14318 + protein coding gene voltage-dependent anion channel 2
Tssr124456 14 21831842 to 21831870 28 + TSS region transcription start site region 124456
Tssr124457 14 21832882 to 21832918 36 + TSS region transcription start site region 124457
Tssr124458 14 21838425 to 21838437 12 + TSS region transcription start site region 124458
Tssr127691 14 21845514 to 21845522 8 - TSS region transcription start site region 127691
Comtd1 14 21845861 to 21848910 3049 - protein coding gene catechol-O-methyltransferase domain containing 1
Cpgi6222 14 21847238 to 21849169 1931 CpG island CpG island 6222
A430057M04Rik 14 21847578 to 21856931 9353 + antisense lncRNA gene RIKEN cDNA A430057M04 gene
Tssr127692 14 21848280 to 21848296 16 - TSS region transcription start site region 127692
Tssr124459 14 21848444 to 21848456 12 + TSS region transcription start site region 124459
Tssr124460 14 21848466 to 21848487 21 + TSS region transcription start site region 124460
Tssr124461 14 21848510 to 21848545 35 + TSS region transcription start site region 124461
Tssr127693 14 21848842 to 21848852 10 - TSS region transcription start site region 127693
Tssr127694 14 21848878 to 21848921 43 - TSS region transcription start site region 127694
Tssr127695 14 21848924 to 21848938 14 - TSS region transcription start site region 127695
Tssr4340 14 21857030 to 21857031 1 + TSS region transcription start site region 4340
4931407E12Rik 14 21868630 to 21889766 21136 - lincRNA gene RIKEN cDNA 4931407E12 gene
D14Mit126 14 21873066 to 21873205 139 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 126
Tssr127696 14 21889763 to 21889791 28 - TSS region transcription start site region 127696
Tssr127697 14 21889814 to 21889819 5 - TSS region transcription start site region 127697
D14Mit2 14 21897484 to 21897620 136 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 2
D14Mit148 14 21906608 to 21906736 128 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 148
Gm37590 14 21932095 to 21952399 20304 + unclassified gene predicted gene, 37590