Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:20717578-22986931

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316 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
sky 14 12481829 to 21012571 8530742 heritable phenotypic marker severe kyphosis
Zswim8 14 20707552 to 20723619 16067 + protein coding gene zinc finger SWIM-type containing 8
Ndst2 14 20723730 to 20734562 10832 - protein coding gene N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
Tssr127657 14 20733579 to 20733595 16 - TSS region transcription start site region 127657
Tssr127658 14 20733598 to 20733646 48 - TSS region transcription start site region 127658
Tssr127659 14 20733647 to 20733672 25 - TSS region transcription start site region 127659
Cpgi6211 14 20733831 to 20734862 1031 CpG island CpG island 6211
Tssr127660 14 20734302 to 20734313 11 - TSS region transcription start site region 127660
Tssr127661 14 20734317 to 20734361 44 - TSS region transcription start site region 127661
Tssr127662 14 20734516 to 20734547 31 - TSS region transcription start site region 127662
Tssr127663 14 20734557 to 20734584 27 - TSS region transcription start site region 127663
Camk2g 14 20734875 to 20794088 59213 - protein coding gene calcium/calmodulin-dependent protein kinase II gamma
Cpgi6212 14 20757536 to 20757858 322 CpG island CpG island 6212
Cpgi6213 14 20792939 to 20794534 1595 CpG island CpG island 6213
Tssr127664 14 20793983 to 20793994 11 - TSS region transcription start site region 127664
Tssr127665 14 20794009 to 20794098 89 - TSS region transcription start site region 127665
Tssr124397 14 20794194 to 20794230 36 + TSS region transcription start site region 124397
Gm30108 14 20794239 to 20796560 2321 + lincRNA gene predicted gene, 30108
Tssr124398 14 20794255 to 20794275 20 + TSS region transcription start site region 124398
D14Mit12 14 20831810 to 20832041 231 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 12
Cpgi6214 14 20836226 to 20836892 666 CpG island CpG island 6214
Tssr124399 14 20836653 to 20836669 16 + TSS region transcription start site region 124399
Plau 14 20836660 to 20843385 6725 + protein coding gene plasminogen activator, urokinase
Wta3 14 20837405 to 20837582 177 QTL weight adult 3
D14Nds1 14 20837405 to 20837582 177 DNA segment DNA segment, Chr 14, Nuffield Department of Surgery 1
Tssr124400 14 20838755 to 20838780 25 + TSS region transcription start site region 124400
Tssr124401 14 20843236 to 20843241 5 + TSS region transcription start site region 124401
Gm6128 14 20856014 to 20856421 407 - pseudogene predicted pseudogene 6128
Gm30212 14 20888443 to 20917972 29529 + lncRNA gene predicted gene, 30212
Cpgi6215 14 20928810 to 20930292 1482 CpG island CpG island 6215
Tssr124402 14 20929200 to 20929205 5 + TSS region transcription start site region 124402
Tssr124403 14 20929392 to 20929403 11 + TSS region transcription start site region 124403
Vcl 14 20929398 to 21033676 104278 + protein coding gene vinculin
Tssr124404 14 20929416 to 20929451 35 + TSS region transcription start site region 124404
Tssr124405 14 20967256 to 20967275 19 + TSS region transcription start site region 124405
Phsq1 14 21000000 to 3000000 -18000000 QTL percent hyperactivated sperm QTL 1
Gm30274 14 21010173 to 21011394 1221 - pseudogene predicted gene, 30274
Tssr127666 14 21011339 to 21011355 16 - TSS region transcription start site region 127666
Epfpq1 14 21012382 to 71648361 50635979 QTL epididymal fat percentage QTL 1
D14Mit50 14 21012382 to 21012571 189 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 50
Tssr124406 14 21020681 to 21020698 17 + TSS region transcription start site region 124406
Tssr124407 14 21032428 to 21032441 13 + TSS region transcription start site region 124407
Tssr124408 14 21032454 to 21032465 11 + TSS region transcription start site region 124408
Tssr124409 14 21032507 to 21032522 15 + TSS region transcription start site region 124409
Ap3m1 14 21033742 to 21052535 18793 - protein coding gene adaptor-related protein complex 3, mu 1 subunit
Tssr127667 14 21038443 to 21038447 4 - TSS region transcription start site region 127667
Tssr127668 14 21047945 to 21047957 12 - TSS region transcription start site region 127668
Tssr127669 14 21049442 to 21049461 19 - TSS region transcription start site region 127669
Tssr127670 14 21050718 to 21050722 4 - TSS region transcription start site region 127670
Tssr127671 14 21051539 to 21051563 24 - TSS region transcription start site region 127671
Cpgi6216 14 21051724 to 21053068 1344 CpG island CpG island 6216
Tssr124410 14 21051834 to 21051839 5 + TSS region transcription start site region 124410
Tssr127672 14 21052177 to 21052225 48 - TSS region transcription start site region 127672
Tssr127673 14 21052420 to 21052448 28 - TSS region transcription start site region 127673
Tssr127674 14 21052452 to 21052510 58 - TSS region transcription start site region 127674
Adk 14 21052574 to 21448569 395995 + protein coding gene adenosine kinase
Tssr124411 14 21052577 to 21052589 12 + TSS region transcription start site region 124411
Tssr124412 14 21052594 to 21052633 39 + TSS region transcription start site region 124412
Cpgi6217 14 21075702 to 21076486 784 CpG island CpG island 6217
Tssr124413 14 21076136 to 21076147 11 + TSS region transcription start site region 124413
Tssr124414 14 21076169 to 21076222 53 + TSS region transcription start site region 124414
Tssr124415 14 21077021 to 21077025 4 + TSS region transcription start site region 124415
D14Mit251 14 21080979 to 21081106 127 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 251
Tssr124416 14 21104418 to 21104421 3 + TSS region transcription start site region 124416
Tssr124417 14 21111248 to 21111256 8 + TSS region transcription start site region 124417
Tssr124418 14 21179656 to 21179659 3 + TSS region transcription start site region 124418
Tssr124419 14 21182663 to 21182674 11 + TSS region transcription start site region 124419
D14Dcr16 14 21182920 to 21183015 95 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 16
Tssr124420 14 21194479 to 21194485 6 + TSS region transcription start site region 124420
Tssr124421 14 21194574 to 21194586 12 + TSS region transcription start site region 124421
B130016H12Rik 14 21204202 to 21209189 4987 unclassified gene RIKEN cDNA B130016H12 gene
Tssr124422 14 21243472 to 21243482 10 + TSS region transcription start site region 124422
Tssr124423 14 21250606 to 21250623 17 + TSS region transcription start site region 124423
Gm26372 14 21263624 to 21263859 235 + unclassified non-coding RNA gene predicted gene, 26372
A430108C13Rik 14 21270454 to 21275125 4671 unclassified gene RIKEN cDNA A430108C13 gene
Tssr124424 14 21271523 to 21271533 10 + TSS region transcription start site region 124424
Tssr124425 14 21272715 to 21272728 13 + TSS region transcription start site region 124425
Tssr4338 14 21276886 to 21276887 1 + TSS region transcription start site region 4338
Tssr124426 14 21280743 to 21280749 6 + TSS region transcription start site region 124426
Tssr124427 14 21307595 to 21307598 3 + TSS region transcription start site region 124427
Tssr124428 14 21313468 to 21313477 9 + TSS region transcription start site region 124428
Tssr124429 14 21345573 to 21345592 19 + TSS region transcription start site region 124429
Tssr124430 14 21356317 to 21356321 4 + TSS region transcription start site region 124430
Tssr124431 14 21426683 to 21426684 1 + TSS region transcription start site region 124431
Gm30363 14 21449949 to 21473360 23411 - lncRNA gene predicted gene, 30363
Gm25864 14 21450474 to 21450565 91 + snRNA gene predicted gene, 25864
Tssr124432 14 21460942 to 21460945 3 + TSS region transcription start site region 124432
Tssr124433 14 21477287 to 21477289 2 + TSS region transcription start site region 124433
Tssr124434 14 21481428 to 21481439 11 + TSS region transcription start site region 124434
Kat6b 14 21498812 to 21672478 173666 + protein coding gene K(lysine) acetyltransferase 6B
Cpgi6218 14 21499005 to 21501524 2519 CpG island CpG island 6218
Tssr124435 14 21499221 to 21499238 17 + TSS region transcription start site region 124435
Tssr4339 14 21499730 to 21499775 45 + TSS region transcription start site region 4339
Tssr124436 14 21499831 to 21499883 52 + TSS region transcription start site region 124436
Tssr127675 14 21500283 to 21500299 16 - TSS region transcription start site region 127675
Tssr127676 14 21500376 to 21500398 22 - TSS region transcription start site region 127676
Tssr124437 14 21500879 to 21500897 18 + TSS region transcription start site region 124437
Tssr124438 14 21500927 to 21500934 7 + TSS region transcription start site region 124438
Tssr124439 14 21536714 to 21536723 9 + TSS region transcription start site region 124439
Tssr124440 14 21556000 to 21556003 3 + TSS region transcription start site region 124440
Tssr124441 14 21560955 to 21560960 5 + TSS region transcription start site region 124441
D14Ertd725e 14 21603115 to 21603346 231 DNA segment DNA segment, Chr 14, ERATO Doi 725, expressed
Tssr124442 14 21622558 to 21622562 4 + TSS region transcription start site region 124442
Tssr124443 14 21657530 to 21657571 41 + TSS region transcription start site region 124443
Dupd1 14 21676537 to 21714576 38039 - protein coding gene dual specificity phosphatase and pro isomerase domain containing 1
Cpgi6219 14 21686538 to 21687056 518 CpG island CpG island 6219
Tssr127677 14 21714550 to 21714567 17 - TSS region transcription start site region 127677
Tssr127678 14 21714570 to 21714584 14 - TSS region transcription start site region 127678
Dusp13 14 21733395 to 21748988 15593 - protein coding gene dual specificity phosphatase 13
Tssr127679 14 21740395 to 21740420 25 - TSS region transcription start site region 127679
Tssr127680 14 21740422 to 21740445 23 - TSS region transcription start site region 127680
Tssr127681 14 21741449 to 21741456 7 - TSS region transcription start site region 127681
Tssr127682 14 21741463 to 21741470 7 - TSS region transcription start site region 127682
Tssr127683 14 21741480 to 21741503 23 - TSS region transcription start site region 127683
Gm15935 14 21741543 to 21746632 5089 + antisense lncRNA gene predicted gene 15935
Tssr124444 14 21741579 to 21741593 14 + TSS region transcription start site region 124444
Tssr127684 14 21742870 to 21742893 23 - TSS region transcription start site region 127684
Tssr127685 14 21742904 to 21742908 4 - TSS region transcription start site region 127685
Tssr127686 14 21742909 to 21742918 9 - TSS region transcription start site region 127686
Tssr127687 14 21745204 to 21745235 31 - TSS region transcription start site region 127687
Tssr124445 14 21745486 to 21745512 26 + TSS region transcription start site region 124445
Tssr127688 14 21748610 to 21748650 40 - TSS region transcription start site region 127688
Cpgi6220 14 21750395 to 21751518 1123 CpG island CpG island 6220
Tssr124446 14 21750525 to 21750536 11 + TSS region transcription start site region 124446
Samd8 14 21750531 to 21798725 48194 + protein coding gene sterile alpha motif domain containing 8
Tssr124447 14 21750542 to 21750608 66 + TSS region transcription start site region 124447
Tssr124448 14 21750613 to 21750624 11 + TSS region transcription start site region 124448
Tssr127689 14 21751375 to 21751384 9 - TSS region transcription start site region 127689
Tssr124449 14 21757770 to 21757774 4 + TSS region transcription start site region 124449
Tssr124450 14 21776766 to 21776799 33 + TSS region transcription start site region 124450
Tssr124451 14 21797794 to 21797806 12 + TSS region transcription start site region 124451
Tssr124452 14 21797809 to 21797826 17 + TSS region transcription start site region 124452
Tssr124453 14 21797973 to 21797995 22 + TSS region transcription start site region 124453
Mcsq2 14 21810000 to 28728000 6918000 QTL methacholine sensitivity QTL 2, baseline
Gm23502 14 21812711 to 21812855 144 + snRNA gene predicted gene, 23502
Cpgi6221 14 21830921 to 21832144 1223 CpG island CpG island 6221
Tssr127690 14 21831123 to 21831129 6 - TSS region transcription start site region 127690
Tssr124454 14 21831519 to 21831530 11 + TSS region transcription start site region 124454
Tssr124455 14 21831531 to 21831574 43 + TSS region transcription start site region 124455
Vdac2 14 21831561 to 21845879 14318 + protein coding gene voltage-dependent anion channel 2
Tssr124456 14 21831842 to 21831870 28 + TSS region transcription start site region 124456
Tssr124457 14 21832882 to 21832918 36 + TSS region transcription start site region 124457
Tssr124458 14 21838425 to 21838437 12 + TSS region transcription start site region 124458
Tssr127691 14 21845514 to 21845522 8 - TSS region transcription start site region 127691
Comtd1 14 21845861 to 21848910 3049 - protein coding gene catechol-O-methyltransferase domain containing 1
Cpgi6222 14 21847238 to 21849169 1931 CpG island CpG island 6222
A430057M04Rik 14 21847578 to 21856931 9353 + antisense lncRNA gene RIKEN cDNA A430057M04 gene
Tssr127692 14 21848280 to 21848296 16 - TSS region transcription start site region 127692
Tssr124459 14 21848444 to 21848456 12 + TSS region transcription start site region 124459
Tssr124460 14 21848466 to 21848487 21 + TSS region transcription start site region 124460
Tssr124461 14 21848510 to 21848545 35 + TSS region transcription start site region 124461
Tssr127693 14 21848842 to 21848852 10 - TSS region transcription start site region 127693
Tssr127694 14 21848878 to 21848921 43 - TSS region transcription start site region 127694
Tssr127695 14 21848924 to 21848938 14 - TSS region transcription start site region 127695
Tssr4340 14 21857030 to 21857031 1 + TSS region transcription start site region 4340
4931407E12Rik 14 21868630 to 21889766 21136 - lincRNA gene RIKEN cDNA 4931407E12 gene
D14Mit126 14 21873066 to 21873205 139 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 126
Tssr127696 14 21889763 to 21889791 28 - TSS region transcription start site region 127696
Tssr127697 14 21889814 to 21889819 5 - TSS region transcription start site region 127697
D14Mit2 14 21897484 to 21897620 136 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 2
D14Mit148 14 21906608 to 21906736 128 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 148
Gm37590 14 21932095 to 21952399 20304 + unclassified gene predicted gene, 37590
Cpgi6223 14 21981486 to 21981843 357 CpG island CpG island 6223
Cpgi6224 14 21982588 to 21983269 681 CpG island CpG island 6224
Zfp503 14 21983962 to 21989601 5639 - protein coding gene zinc finger protein 503
Cpgi6225 14 21984708 to 21986686 1978 CpG island CpG island 6225
Tssr127698 14 21985653 to 21985657 4 - TSS region transcription start site region 127698
Cpgi6226 14 21987084 to 21988573 1489 CpG island CpG island 6226
Tssr127699 14 21987493 to 21987509 16 - TSS region transcription start site region 127699
Tssr127700 14 21987556 to 21987573 17 - TSS region transcription start site region 127700
Tssr127701 14 21987861 to 21987882 21 - TSS region transcription start site region 127701
Tssr127702 14 21987885 to 21987897 12 - TSS region transcription start site region 127702
Tssr127703 14 21987994 to 21988009 15 - TSS region transcription start site region 127703
Tssr127704 14 21988414 to 21988436 22 - TSS region transcription start site region 127704
Cpgi6227 14 21988919 to 21989993 1074 CpG island CpG island 6227
Tssr127705 14 21989475 to 21989493 18 - TSS region transcription start site region 127705
A330001L22Rik 14 21989744 to 21991133 1389 unclassified non-coding RNA gene RIKEN cDNA A330001L22 gene
Tssr124462 14 21989932 to 21989970 38 + TSS region transcription start site region 124462
Cpgi6228 14 21990612 to 21991023 411 CpG island CpG island 6228
C130012C08Rik 14 21992436 to 21996100 3664 + lncRNA gene RIKEN cDNA C130012C08 gene
Cpgi6229 14 21994194 to 21994423 229 CpG island CpG island 6229
Cpgi6230 14 21994836 to 21995719 883 CpG island CpG island 6230
Tssr124463 14 21995753 to 21995766 13 + TSS region transcription start site region 124463
Tssr127706 14 22013156 to 22013186 30 - TSS region transcription start site region 127706
Gm41106 14 22013778 to 22018805 5027 + lncRNA gene predicted gene, 41106
Cpgi6231 14 22019488 to 22020030 542 CpG island CpG island 6231
Tssr4341 14 22019641 to 22019644 3 + TSS region transcription start site region 4341
Lrmda 14 22019712 to 23056085 1036373 + protein coding gene leucine rich melanocyte differentiation associated
Tssr124464 14 22019791 to 22019808 17 + TSS region transcription start site region 124464
Tssr124465 14 22019809 to 22019832 23 + TSS region transcription start site region 124465
Tssr124466 14 22019833 to 22019856 23 + TSS region transcription start site region 124466
Gm27532 14 22021958 to 22022070 112 - miRNA gene predicted gene, 27532
Tssr124467 14 22022706 to 22022710 4 + TSS region transcription start site region 124467
Gm41107 14 22031238 to 22060757 29519 + lncRNA gene predicted gene, 41107
Tssr124468 14 22031963 to 22031974 11 + TSS region transcription start site region 124468
Gm7480 14 22032086 to 22036103 4017 - antisense lncRNA gene predicted gene 7480
Tssr124469 14 22032189 to 22032229 40 + TSS region transcription start site region 124469
Tssr124470 14 22064050 to 22064074 24 + TSS region transcription start site region 124470
Tssr124471 14 22079793 to 22079821 28 + TSS region transcription start site region 124471
Tssr124472 14 22079847 to 22079876 29 + TSS region transcription start site region 124472