Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:20678443-21127972

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
sky 14 12481829 to 21012571 8530742 heritable phenotypic marker severe kyphosis
Sec24c 14 20674308 to 20694852 20544 + protein coding gene Sec24 related gene family, member C (S. cerevisiae)
Tssr124389 14 20682742 to 20682767 25 + TSS region transcription start site region 124389
Tssr124390 14 20688476 to 20688494 18 + TSS region transcription start site region 124390
Mir6946 14 20690635 to 20690703 68 + miRNA gene microRNA 6946
Cpgi6208 14 20694567 to 20696040 1473 CpG island CpG island 6208
Tssr124391 14 20694956 to 20694985 29 + TSS region transcription start site region 124391
Fut11 14 20694968 to 20700197 5229 + protein coding gene fucosyltransferase 11
Tssr124392 14 20694989 to 20695000 11 + TSS region transcription start site region 124392
Tssr124393 14 20695331 to 20695372 41 + TSS region transcription start site region 124393
Gm25328 14 20701523 to 20701629 106 + snRNA gene predicted gene, 25328
6230400D17Rik 14 20702012 to 20703099 1087 - antisense lncRNA gene RIKEN cDNA 6230400D17 gene
Cpgi6209 14 20702630 to 20703462 832 CpG island CpG island 6209
Tssr127655 14 20702971 to 20702985 14 - TSS region transcription start site region 127655
Tssr127656 14 20702991 to 20703034 43 - TSS region transcription start site region 127656
Chchd1 14 20703027 to 20704425 1398 + protein coding gene coiled-coil-helix-coiled-coil-helix domain containing 1
Tssr124394 14 20703042 to 20703077 35 + TSS region transcription start site region 124394
D14Mit206 14 20703804 to 20703925 121 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 206
Cpgi6210 14 20707065 to 20708188 1123 CpG island CpG island 6210
Tssr124395 14 20707548 to 20707555 7 + TSS region transcription start site region 124395
Zswim8 14 20707552 to 20723619 16067 + protein coding gene zinc finger SWIM-type containing 8
Tssr124396 14 20707556 to 20707616 60 + TSS region transcription start site region 124396
Ndst2 14 20723730 to 20734562 10832 - protein coding gene N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
Tssr127657 14 20733579 to 20733595 16 - TSS region transcription start site region 127657
Tssr127658 14 20733598 to 20733646 48 - TSS region transcription start site region 127658
Tssr127659 14 20733647 to 20733672 25 - TSS region transcription start site region 127659
Cpgi6211 14 20733831 to 20734862 1031 CpG island CpG island 6211
Tssr127660 14 20734302 to 20734313 11 - TSS region transcription start site region 127660
Tssr127661 14 20734317 to 20734361 44 - TSS region transcription start site region 127661
Tssr127662 14 20734516 to 20734547 31 - TSS region transcription start site region 127662
Tssr127663 14 20734557 to 20734584 27 - TSS region transcription start site region 127663
Camk2g 14 20734875 to 20794088 59213 - protein coding gene calcium/calmodulin-dependent protein kinase II gamma
Cpgi6212 14 20757536 to 20757858 322 CpG island CpG island 6212
Cpgi6213 14 20792939 to 20794534 1595 CpG island CpG island 6213
Tssr127664 14 20793983 to 20793994 11 - TSS region transcription start site region 127664
Tssr127665 14 20794009 to 20794098 89 - TSS region transcription start site region 127665
Tssr124397 14 20794194 to 20794230 36 + TSS region transcription start site region 124397
Gm30108 14 20794239 to 20796560 2321 + lincRNA gene predicted gene, 30108
Tssr124398 14 20794255 to 20794275 20 + TSS region transcription start site region 124398
D14Mit12 14 20831810 to 20832041 231 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 12
Cpgi6214 14 20836226 to 20836892 666 CpG island CpG island 6214
Tssr124399 14 20836653 to 20836669 16 + TSS region transcription start site region 124399
Plau 14 20836660 to 20843385 6725 + protein coding gene plasminogen activator, urokinase
D14Nds1 14 20837405 to 20837582 177 DNA segment DNA segment, Chr 14, Nuffield Department of Surgery 1
Wta3 14 20837405 to 20837582 177 QTL weight adult 3
Tssr124400 14 20838755 to 20838780 25 + TSS region transcription start site region 124400
Tssr124401 14 20843236 to 20843241 5 + TSS region transcription start site region 124401
Gm6128 14 20856014 to 20856421 407 - pseudogene predicted pseudogene 6128
Gm30212 14 20888443 to 20917972 29529 + lncRNA gene predicted gene, 30212
Cpgi6215 14 20928810 to 20930292 1482 CpG island CpG island 6215
Tssr124402 14 20929200 to 20929205 5 + TSS region transcription start site region 124402
Tssr124403 14 20929392 to 20929403 11 + TSS region transcription start site region 124403
Vcl 14 20929398 to 21033676 104278 + protein coding gene vinculin
Tssr124404 14 20929416 to 20929451 35 + TSS region transcription start site region 124404
Tssr124405 14 20967256 to 20967275 19 + TSS region transcription start site region 124405
Phsq1 14 21000000 to 3000000 -18000000 QTL percent hyperactivated sperm QTL 1
Gm30274 14 21010173 to 21011394 1221 - pseudogene predicted gene, 30274
Tssr127666 14 21011339 to 21011355 16 - TSS region transcription start site region 127666
Epfpq1 14 21012382 to 71648361 50635979 QTL epididymal fat percentage QTL 1
D14Mit50 14 21012382 to 21012571 189 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 50
Tssr124406 14 21020681 to 21020698 17 + TSS region transcription start site region 124406
Tssr124407 14 21032428 to 21032441 13 + TSS region transcription start site region 124407
Tssr124408 14 21032454 to 21032465 11 + TSS region transcription start site region 124408
Tssr124409 14 21032507 to 21032522 15 + TSS region transcription start site region 124409
Ap3m1 14 21033742 to 21052535 18793 - protein coding gene adaptor-related protein complex 3, mu 1 subunit
Tssr127667 14 21038443 to 21038447 4 - TSS region transcription start site region 127667
Tssr127668 14 21047945 to 21047957 12 - TSS region transcription start site region 127668
Tssr127669 14 21049442 to 21049461 19 - TSS region transcription start site region 127669
Tssr127670 14 21050718 to 21050722 4 - TSS region transcription start site region 127670
Tssr127671 14 21051539 to 21051563 24 - TSS region transcription start site region 127671
Cpgi6216 14 21051724 to 21053068 1344 CpG island CpG island 6216
Tssr124410 14 21051834 to 21051839 5 + TSS region transcription start site region 124410
Tssr127672 14 21052177 to 21052225 48 - TSS region transcription start site region 127672
Tssr127673 14 21052420 to 21052448 28 - TSS region transcription start site region 127673
Tssr127674 14 21052452 to 21052510 58 - TSS region transcription start site region 127674
Adk 14 21052574 to 21448569 395995 + protein coding gene adenosine kinase
Tssr124411 14 21052577 to 21052589 12 + TSS region transcription start site region 124411
Tssr124412 14 21052594 to 21052633 39 + TSS region transcription start site region 124412
Cpgi6217 14 21075702 to 21076486 784 CpG island CpG island 6217
Tssr124413 14 21076136 to 21076147 11 + TSS region transcription start site region 124413
Tssr124414 14 21076169 to 21076222 53 + TSS region transcription start site region 124414
Tssr124415 14 21077021 to 21077025 4 + TSS region transcription start site region 124415
D14Mit251 14 21080979 to 21081106 127 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 251
Tssr124416 14 21104418 to 21104421 3 + TSS region transcription start site region 124416
Tssr124417 14 21111248 to 21111256 8 + TSS region transcription start site region 124417
Kdnw2 14 121032392 to 20837405 -100194987 QTL kidney weight 2