Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:20623687-20703696

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Usp54 14 20548912 to 20641063 92151 - protein coding gene ubiquitin specific peptidase 54
Tssr127640 14 20631355 to 20631368 13 - TSS region transcription start site region 127640
Tssr127641 14 20631731 to 20631735 4 - TSS region transcription start site region 127641
Cpgi6205 14 20640333 to 20641418 1085 CpG island CpG island 6205
Tssr127642 14 20640932 to 20640949 17 - TSS region transcription start site region 127642
Tssr127643 14 20640954 to 20640986 32 - TSS region transcription start site region 127643
Tssr124382 14 20640994 to 20641021 27 + TSS region transcription start site region 124382
2810402E24Rik 14 20641009 to 20644048 3039 + antisense lncRNA gene RIKEN cDNA 2810402E24 gene
Tssr124383 14 20641025 to 20641044 19 + TSS region transcription start site region 124383
Tssr124384 14 20641061 to 20641089 28 + TSS region transcription start site region 124384
Myoz1 14 20649107 to 20656540 7433 - protein coding gene myozenin 1
Tssr124385 14 20655241 to 20655273 32 + TSS region transcription start site region 124385
Tssr127644 14 20656488 to 20656508 20 - TSS region transcription start site region 127644
Synpo2l 14 20658946 to 20668354 9408 - protein coding gene synaptopodin 2-like
Cpgi6206 14 20660785 to 20661738 953 CpG island CpG island 6206
Tssr127645 14 20660871 to 20660888 17 - TSS region transcription start site region 127645
Tssr127646 14 20663652 to 20663671 19 - TSS region transcription start site region 127646
Tssr127647 14 20663687 to 20663696 9 - TSS region transcription start site region 127647
Tssr127648 14 20664480 to 20664551 71 - TSS region transcription start site region 127648
Tssr127649 14 20664562 to 20664580 18 - TSS region transcription start site region 127649
Tssr127650 14 20664582 to 20664588 6 - TSS region transcription start site region 127650
Tssr127651 14 20668256 to 20668267 11 - TSS region transcription start site region 127651
Tssr127652 14 20668269 to 20668324 55 - TSS region transcription start site region 127652
4733401D01Rik 14 20672640 to 20674210 1570 unclassified gene RIKEN cDNA 4733401D01 gene
Tssr127653 14 20674114 to 20674126 12 - TSS region transcription start site region 127653
Cpgi6207 14 20674145 to 20674812 667 CpG island CpG island 6207
Tssr124386 14 20674298 to 20674307 9 + TSS region transcription start site region 124386
Sec24c 14 20674308 to 20694852 20544 + protein coding gene Sec24 related gene family, member C (S. cerevisiae)
Tssr124387 14 20674311 to 20674371 60 + TSS region transcription start site region 124387
Tssr124388 14 20674496 to 20674559 63 + TSS region transcription start site region 124388
Tssr127654 14 20674708 to 20674716 8 - TSS region transcription start site region 127654
Tssr124389 14 20682742 to 20682767 25 + TSS region transcription start site region 124389
Tssr124390 14 20688476 to 20688494 18 + TSS region transcription start site region 124390
Mir6946 14 20690635 to 20690703 68 + miRNA gene microRNA 6946
Cpgi6208 14 20694567 to 20696040 1473 CpG island CpG island 6208
Tssr124391 14 20694956 to 20694985 29 + TSS region transcription start site region 124391
Fut11 14 20694968 to 20700197 5229 + protein coding gene fucosyltransferase 11
Tssr124392 14 20694989 to 20695000 11 + TSS region transcription start site region 124392
Tssr124393 14 20695331 to 20695372 41 + TSS region transcription start site region 124393
Gm25328 14 20701523 to 20701629 106 + snRNA gene predicted gene, 25328
6230400D17Rik 14 20702012 to 20703099 1087 - antisense lncRNA gene RIKEN cDNA 6230400D17 gene
Cpgi6209 14 20702630 to 20703462 832 CpG island CpG island 6209
Tssr127655 14 20702971 to 20702985 14 - TSS region transcription start site region 127655
Tssr127656 14 20702991 to 20703034 43 - TSS region transcription start site region 127656
Chchd1 14 20703027 to 20704425 1398 + protein coding gene coiled-coil-helix-coiled-coil-helix domain containing 1
Tssr124394 14 20703042 to 20703077 35 + TSS region transcription start site region 124394