Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:20500514-20730520

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppp3cb 14 20499364 to 20546573 47209 - protein coding gene protein phosphatase 3, catalytic subunit, beta isoform
Tssr127627 14 20501087 to 20501100 13 - TSS region transcription start site region 127627
Tssr127628 14 20531845 to 20531867 22 - TSS region transcription start site region 127628
Tssr127629 14 20538177 to 20538181 4 - TSS region transcription start site region 127629
Tssr127630 14 20544687 to 20544697 10 - TSS region transcription start site region 127630
2510010E17Rik 14 20545309 to 20546166 857 unclassified gene RIKEN cDNA 2510010E17 gene
Cpgi6204 14 20545709 to 20546774 1065 CpG island CpG island 6204
Tssr124381 14 20546157 to 20546161 4 + TSS region transcription start site region 124381
1810062O18Rik 14 20546293 to 20570680 24387 + antisense lncRNA gene RIKEN cDNA 1810062O18 gene
Tssr127631 14 20546462 to 20546481 19 - TSS region transcription start site region 127631
Tssr127632 14 20546482 to 20546485 3 - TSS region transcription start site region 127632
Tssr127633 14 20546517 to 20546582 65 - TSS region transcription start site region 127633
Usp54 14 20548912 to 20641063 92151 - protein coding gene ubiquitin specific peptidase 54
Tssr127634 14 20571205 to 20571210 5 - TSS region transcription start site region 127634
Tssr127635 14 20607871 to 20607900 29 - TSS region transcription start site region 127635
Tssr127636 14 20610279 to 20610305 26 - TSS region transcription start site region 127636
Tssr127637 14 20615514 to 20615520 6 - TSS region transcription start site region 127637
Tssr127638 14 20618313 to 20618334 21 - TSS region transcription start site region 127638
Tssr127639 14 20618339 to 20618365 26 - TSS region transcription start site region 127639
Tssr127640 14 20631355 to 20631368 13 - TSS region transcription start site region 127640
Tssr127641 14 20631731 to 20631735 4 - TSS region transcription start site region 127641
Cpgi6205 14 20640333 to 20641418 1085 CpG island CpG island 6205
Tssr127642 14 20640932 to 20640949 17 - TSS region transcription start site region 127642
Tssr127643 14 20640954 to 20640986 32 - TSS region transcription start site region 127643
Tssr124382 14 20640994 to 20641021 27 + TSS region transcription start site region 124382
2810402E24Rik 14 20641009 to 20644048 3039 + antisense lncRNA gene RIKEN cDNA 2810402E24 gene
Tssr124383 14 20641025 to 20641044 19 + TSS region transcription start site region 124383
Tssr124384 14 20641061 to 20641089 28 + TSS region transcription start site region 124384
Myoz1 14 20649107 to 20656540 7433 - protein coding gene myozenin 1
Tssr124385 14 20655241 to 20655273 32 + TSS region transcription start site region 124385
Tssr127644 14 20656488 to 20656508 20 - TSS region transcription start site region 127644
Synpo2l 14 20658946 to 20668354 9408 - protein coding gene synaptopodin 2-like
Cpgi6206 14 20660785 to 20661738 953 CpG island CpG island 6206
Tssr127645 14 20660871 to 20660888 17 - TSS region transcription start site region 127645
Tssr127646 14 20663652 to 20663671 19 - TSS region transcription start site region 127646
Tssr127647 14 20663687 to 20663696 9 - TSS region transcription start site region 127647
Tssr127648 14 20664480 to 20664551 71 - TSS region transcription start site region 127648
Tssr127649 14 20664562 to 20664580 18 - TSS region transcription start site region 127649
Tssr127650 14 20664582 to 20664588 6 - TSS region transcription start site region 127650
Tssr127651 14 20668256 to 20668267 11 - TSS region transcription start site region 127651
Tssr127652 14 20668269 to 20668324 55 - TSS region transcription start site region 127652
4733401D01Rik 14 20672640 to 20674210 1570 unclassified gene RIKEN cDNA 4733401D01 gene
Tssr127653 14 20674114 to 20674126 12 - TSS region transcription start site region 127653
Cpgi6207 14 20674145 to 20674812 667 CpG island CpG island 6207
Tssr124386 14 20674298 to 20674307 9 + TSS region transcription start site region 124386
Sec24c 14 20674308 to 20694852 20544 + protein coding gene Sec24 related gene family, member C (S. cerevisiae)
Tssr124387 14 20674311 to 20674371 60 + TSS region transcription start site region 124387
Tssr124388 14 20674496 to 20674559 63 + TSS region transcription start site region 124388
Tssr127654 14 20674708 to 20674716 8 - TSS region transcription start site region 127654
Tssr124389 14 20682742 to 20682767 25 + TSS region transcription start site region 124389
Tssr124390 14 20688476 to 20688494 18 + TSS region transcription start site region 124390
Mir6946 14 20690635 to 20690703 68 + miRNA gene microRNA 6946
Cpgi6208 14 20694567 to 20696040 1473 CpG island CpG island 6208
Tssr124391 14 20694956 to 20694985 29 + TSS region transcription start site region 124391
Fut11 14 20694968 to 20700197 5229 + protein coding gene fucosyltransferase 11
Tssr124392 14 20694989 to 20695000 11 + TSS region transcription start site region 124392
Tssr124393 14 20695331 to 20695372 41 + TSS region transcription start site region 124393
Gm25328 14 20701523 to 20701629 106 + snRNA gene predicted gene, 25328
6230400D17Rik 14 20702012 to 20703099 1087 - antisense lncRNA gene RIKEN cDNA 6230400D17 gene
Cpgi6209 14 20702630 to 20703462 832 CpG island CpG island 6209
Tssr127655 14 20702971 to 20702985 14 - TSS region transcription start site region 127655
Tssr127656 14 20702991 to 20703034 43 - TSS region transcription start site region 127656
Chchd1 14 20703027 to 20704425 1398 + protein coding gene coiled-coil-helix-coiled-coil-helix domain containing 1
Tssr124394 14 20703042 to 20703077 35 + TSS region transcription start site region 124394
D14Mit206 14 20703804 to 20703925 121 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 206
Cpgi6210 14 20707065 to 20708188 1123 CpG island CpG island 6210
Tssr124395 14 20707548 to 20707555 7 + TSS region transcription start site region 124395
Zswim8 14 20707552 to 20723619 16067 + protein coding gene zinc finger SWIM-type containing 8
Tssr124396 14 20707556 to 20707616 60 + TSS region transcription start site region 124396
Ndst2 14 20723730 to 20734562 10832 - protein coding gene N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2