Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:20214859-20453121

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm48395 14 20215502 to 20221425 5923 + lincRNA gene predicted gene, 48395
Gm2048 14 20249415 to 20260932 11517 - pseudogene predicted gene 2048
Kcnk16 14 20262756 to 20269162 6406 - protein coding gene potassium channel, subfamily K, member 16
Tssr127598 14 20263433 to 20263460 27 - TSS region transcription start site region 127598
Tssr127599 14 20269173 to 20269244 71 - TSS region transcription start site region 127599
Tssr127600 14 20269253 to 20269275 22 - TSS region transcription start site region 127600
Nudt13 14 20294697 to 20317578 22881 + protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 13
Tssr124377 14 20294706 to 20294745 39 + TSS region transcription start site region 124377
Tssr124378 14 20306777 to 20306779 2 + TSS region transcription start site region 124378
Ecd 14 20319859 to 20348121 28262 - protein coding gene ecdysoneless cell cycle regulator
Cpgi6199 14 20347871 to 20348496 625 CpG island CpG island 6199
Tssr127601 14 20348019 to 20348033 14 - TSS region transcription start site region 127601
Tssr127602 14 20348040 to 20348101 61 - TSS region transcription start site region 127602
Tssr124379 14 20348159 to 20348244 85 + TSS region transcription start site region 124379
Fam149b 14 20348162 to 20383491 35329 + protein coding gene family with sequence similarity 149, member B
Tssr124380 14 20348303 to 20348325 22 + TSS region transcription start site region 124380
Gm30054 14 20365964 to 20369315 3351 - antisense lncRNA gene predicted gene, 30054
Tssr127603 14 20378840 to 20378886 46 - TSS region transcription start site region 127603
Dnajc9 14 20384638 to 20388910 4272 - protein coding gene DnaJ heat shock protein family (Hsp40) member C9
Cpgi6200 14 20388368 to 20389247 879 CpG island CpG island 6200
Tssr127604 14 20388822 to 20388912 90 - TSS region transcription start site region 127604
Tssr127605 14 20388913 to 20388927 14 - TSS region transcription start site region 127605
Mrps16 14 20391231 to 20393555 2324 - protein coding gene mitochondrial ribosomal protein S16
Cpgi6201 14 20393145 to 20393966 821 CpG island CpG island 6201
Tssr127606 14 20393445 to 20393463 18 - TSS region transcription start site region 127606
Tssr127607 14 20393473 to 20393572 99 - TSS region transcription start site region 127607
Tssr127608 14 20393603 to 20393643 40 - TSS region transcription start site region 127608
Cfap70 14 20394193 to 20452226 58033 - protein coding gene cilia and flagella associated protein 70
Tssr127609 14 20395064 to 20395090 26 - TSS region transcription start site region 127609
Tssr127610 14 20397348 to 20397358 10 - TSS region transcription start site region 127610
7330404K18Rik 14 20398359 to 20398930 571 + antisense lncRNA gene RIKEN cDNA 7330404K18 gene
Cpgi6202 14 20442389 to 20442588 199 CpG island CpG island 6202
Tssr127611 14 20452176 to 20452183 7 - TSS region transcription start site region 127611
Tssr127612 14 20452187 to 20452208 21 - TSS region transcription start site region 127612
Tssr127613 14 20452217 to 20452241 24 - TSS region transcription start site region 127613