Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:20137756-20394162

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr127592 14 20138509 to 20138519 10 - TSS region transcription start site region 127592
Tssr127593 14 20138547 to 20138566 19 - TSS region transcription start site region 127593
Kcnk5 14 20140057 to 20181782 41725 - protein coding gene potassium channel, subfamily K, member 5
Tssr127594 14 20143688 to 20143713 25 - TSS region transcription start site region 127594
Tssr127595 14 20145860 to 20145906 46 - TSS region transcription start site region 127595
Cpgi6197 14 20180796 to 20181076 280 CpG island CpG island 6197
Cpgi6198 14 20181296 to 20182094 798 CpG island CpG island 6198
Tssr127596 14 20181773 to 20181790 17 - TSS region transcription start site region 127596
Tssr127597 14 20181808 to 20181809 1 - TSS region transcription start site region 127597
Gm48394 14 20199702 to 20199954 252 - pseudogene predicted gene, 48394
Gm24912 14 20199996 to 20200112 116 - snoRNA gene predicted gene, 24912
Gm48395 14 20215502 to 20221425 5923 + lincRNA gene predicted gene, 48395
Gm2048 14 20249415 to 20260932 11517 - pseudogene predicted gene 2048
Kcnk16 14 20262756 to 20269162 6406 - protein coding gene potassium channel, subfamily K, member 16
Tssr127598 14 20263433 to 20263460 27 - TSS region transcription start site region 127598
Tssr127599 14 20269173 to 20269244 71 - TSS region transcription start site region 127599
Tssr127600 14 20269253 to 20269275 22 - TSS region transcription start site region 127600
Nudt13 14 20294697 to 20317578 22881 + protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 13
Tssr124377 14 20294706 to 20294745 39 + TSS region transcription start site region 124377
Tssr124378 14 20306777 to 20306779 2 + TSS region transcription start site region 124378
Ecd 14 20319859 to 20348121 28262 - protein coding gene ecdysoneless cell cycle regulator
Cpgi6199 14 20347871 to 20348496 625 CpG island CpG island 6199
Tssr127601 14 20348019 to 20348033 14 - TSS region transcription start site region 127601
Tssr127602 14 20348040 to 20348101 61 - TSS region transcription start site region 127602
Tssr124379 14 20348159 to 20348244 85 + TSS region transcription start site region 124379
Fam149b 14 20348162 to 20383491 35329 + protein coding gene family with sequence similarity 149, member B
Tssr124380 14 20348303 to 20348325 22 + TSS region transcription start site region 124380
Gm30054 14 20365964 to 20369315 3351 - antisense lncRNA gene predicted gene, 30054
Tssr127603 14 20378840 to 20378886 46 - TSS region transcription start site region 127603
Dnajc9 14 20384638 to 20388910 4272 - protein coding gene DnaJ heat shock protein family (Hsp40) member C9
Cpgi6200 14 20388368 to 20389247 879 CpG island CpG island 6200
Tssr127604 14 20388822 to 20388912 90 - TSS region transcription start site region 127604
Tssr127605 14 20388913 to 20388927 14 - TSS region transcription start site region 127605
Mrps16 14 20391231 to 20393555 2324 - protein coding gene mitochondrial ribosomal protein S16
Cpgi6201 14 20393145 to 20393966 821 CpG island CpG island 6201
Tssr127606 14 20393445 to 20393463 18 - TSS region transcription start site region 127606
Tssr127607 14 20393473 to 20393572 99 - TSS region transcription start site region 127607
Tssr127608 14 20393603 to 20393643 40 - TSS region transcription start site region 127608