Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:19765502-20671425

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151 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nid2 14 19751265 to 19811787 60522 + protein coding gene nidogen 2
Tssr124374 14 19779584 to 19779621 37 + TSS region transcription start site region 124374
Tssr124375 14 19811275 to 19811294 19 + TSS region transcription start site region 124375
Rtraf 14 19811402 to 19823823 12421 - protein coding gene RNA transcription, translation and transport factor
Cpgi6195 14 19823188 to 19824074 886 CpG island CpG island 6195
Tssr127558 14 19823771 to 19823797 26 - TSS region transcription start site region 127558
Tssr127559 14 19823807 to 19823832 25 - TSS region transcription start site region 127559
Tssr124376 14 19830675 to 19830685 10 + TSS region transcription start site region 124376
D14Ertd670e 14 19838925 to 19844677 5752 + lincRNA gene DNA segment, Chr 14, ERATO Doi 670, expressed
Tssr127560 14 19860598 to 19860621 23 - TSS region transcription start site region 127560
Gm48283 14 19866980 to 19873455 6475 + lincRNA gene predicted gene, 48283
Gng2 14 19872559 to 19977249 104690 - protein coding gene guanine nucleotide binding protein (G protein), gamma 2
Tssr127561 14 19873296 to 19873317 21 - TSS region transcription start site region 127561
Tssr127562 14 19873387 to 19873398 11 - TSS region transcription start site region 127562
Tssr127563 14 19874349 to 19874351 2 - TSS region transcription start site region 127563
Tssr127564 14 19874754 to 19874788 34 - TSS region transcription start site region 127564
Tssr127565 14 19875228 to 19875239 11 - TSS region transcription start site region 127565
Tssr127566 14 19875284 to 19875326 42 - TSS region transcription start site region 127566
Tssr127567 14 19875576 to 19875584 8 - TSS region transcription start site region 127567
Tssr127568 14 19889243 to 19889255 12 - TSS region transcription start site region 127568
Tssr127569 14 19890399 to 19890416 17 - TSS region transcription start site region 127569
Tssr127570 14 19890424 to 19890444 20 - TSS region transcription start site region 127570
Tssr127571 14 19890458 to 19890473 15 - TSS region transcription start site region 127571
Tssr127572 14 19890493 to 19890504 11 - TSS region transcription start site region 127572
Tssr127573 14 19890589 to 19890608 19 - TSS region transcription start site region 127573
Tssr127574 14 19890646 to 19890657 11 - TSS region transcription start site region 127574
Tssr127575 14 19890817 to 19890837 20 - TSS region transcription start site region 127575
Tssr127576 14 19929330 to 19929333 3 - TSS region transcription start site region 127576
Tssr127577 14 19976800 to 19976806 6 - TSS region transcription start site region 127577
Tssr127578 14 19976974 to 19977038 64 - TSS region transcription start site region 127578
Tssr127579 14 19977040 to 19977054 14 - TSS region transcription start site region 127579
Tssr127580 14 19977103 to 19977126 23 - TSS region transcription start site region 127580
Tssr127581 14 19977132 to 19977150 18 - TSS region transcription start site region 127581
Tssr127582 14 19977151 to 19977204 53 - TSS region transcription start site region 127582
Tssr127583 14 19977217 to 19977246 29 - TSS region transcription start site region 127583
Tssr127584 14 19977251 to 19977253 2 - TSS region transcription start site region 127584
Gm48339 14 20057852 to 20058297 445 - pseudogene predicted gene, 48339
Saysd1 14 20075636 to 20083172 7536 - protein coding gene SAYSVFN motif domain containing 1
D14Ertd170e 14 20078276 to 20078475 199 DNA segment DNA segment, Chr 14, ERATO Doi 170, expressed
Cpgi6196 14 20082618 to 20083548 930 CpG island CpG island 6196
Tssr127585 14 20082675 to 20082702 27 - TSS region transcription start site region 127585
Tssr127586 14 20082734 to 20082747 13 - TSS region transcription start site region 127586
Tssr127587 14 20082759 to 20082792 33 - TSS region transcription start site region 127587
Tssr127588 14 20083063 to 20083074 11 - TSS region transcription start site region 127588
Tssr127589 14 20083102 to 20083165 63 - TSS region transcription start site region 127589
Tssr127590 14 20083177 to 20083188 11 - TSS region transcription start site region 127590
Tssr127591 14 20112569 to 20112570 1 - TSS region transcription start site region 127591
Gm41104 14 20129926 to 20131230 1304 + lncRNA gene predicted gene, 41104
Tssr127592 14 20138509 to 20138519 10 - TSS region transcription start site region 127592
Tssr127593 14 20138547 to 20138566 19 - TSS region transcription start site region 127593
Kcnk5 14 20140057 to 20181782 41725 - protein coding gene potassium channel, subfamily K, member 5
Tssr127594 14 20143688 to 20143713 25 - TSS region transcription start site region 127594
Tssr127595 14 20145860 to 20145906 46 - TSS region transcription start site region 127595
Cpgi6197 14 20180796 to 20181076 280 CpG island CpG island 6197
Cpgi6198 14 20181296 to 20182094 798 CpG island CpG island 6198
Tssr127596 14 20181773 to 20181790 17 - TSS region transcription start site region 127596
Tssr127597 14 20181808 to 20181809 1 - TSS region transcription start site region 127597
Gm48394 14 20199702 to 20199954 252 - pseudogene predicted gene, 48394
Gm24912 14 20199996 to 20200112 116 - snoRNA gene predicted gene, 24912
Gm48395 14 20215502 to 20221425 5923 + lincRNA gene predicted gene, 48395
Gm2048 14 20249415 to 20260932 11517 - pseudogene predicted gene 2048
Kcnk16 14 20262756 to 20269162 6406 - protein coding gene potassium channel, subfamily K, member 16
Tssr127598 14 20263433 to 20263460 27 - TSS region transcription start site region 127598
Tssr127599 14 20269173 to 20269244 71 - TSS region transcription start site region 127599
Tssr127600 14 20269253 to 20269275 22 - TSS region transcription start site region 127600
Nudt13 14 20294697 to 20317578 22881 + protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 13
Tssr124377 14 20294706 to 20294745 39 + TSS region transcription start site region 124377
Tssr124378 14 20306777 to 20306779 2 + TSS region transcription start site region 124378
Ecd 14 20319859 to 20348121 28262 - protein coding gene ecdysoneless cell cycle regulator
Cpgi6199 14 20347871 to 20348496 625 CpG island CpG island 6199
Tssr127601 14 20348019 to 20348033 14 - TSS region transcription start site region 127601
Tssr127602 14 20348040 to 20348101 61 - TSS region transcription start site region 127602
Tssr124379 14 20348159 to 20348244 85 + TSS region transcription start site region 124379
Fam149b 14 20348162 to 20383491 35329 + protein coding gene family with sequence similarity 149, member B
Tssr124380 14 20348303 to 20348325 22 + TSS region transcription start site region 124380
Gm30054 14 20365964 to 20369315 3351 - antisense lncRNA gene predicted gene, 30054
Tssr127603 14 20378840 to 20378886 46 - TSS region transcription start site region 127603
Dnajc9 14 20384638 to 20388910 4272 - protein coding gene DnaJ heat shock protein family (Hsp40) member C9
Cpgi6200 14 20388368 to 20389247 879 CpG island CpG island 6200
Tssr127604 14 20388822 to 20388912 90 - TSS region transcription start site region 127604
Tssr127605 14 20388913 to 20388927 14 - TSS region transcription start site region 127605
Mrps16 14 20391231 to 20393555 2324 - protein coding gene mitochondrial ribosomal protein S16
Cpgi6201 14 20393145 to 20393966 821 CpG island CpG island 6201
Tssr127606 14 20393445 to 20393463 18 - TSS region transcription start site region 127606
Tssr127607 14 20393473 to 20393572 99 - TSS region transcription start site region 127607
Tssr127608 14 20393603 to 20393643 40 - TSS region transcription start site region 127608
Cfap70 14 20394193 to 20452226 58033 - protein coding gene cilia and flagella associated protein 70
Tssr127609 14 20395064 to 20395090 26 - TSS region transcription start site region 127609
Tssr127610 14 20397348 to 20397358 10 - TSS region transcription start site region 127610
7330404K18Rik 14 20398359 to 20398930 571 + antisense lncRNA gene RIKEN cDNA 7330404K18 gene
Cpgi6202 14 20442389 to 20442588 199 CpG island CpG island 6202
Tssr127611 14 20452176 to 20452183 7 - TSS region transcription start site region 127611
Tssr127612 14 20452187 to 20452208 21 - TSS region transcription start site region 127612
Tssr127613 14 20452217 to 20452241 24 - TSS region transcription start site region 127613
Anxa7 14 20455261 to 20480133 24872 - protein coding gene annexin A7
Tssr127614 14 20456283 to 20456292 9 - TSS region transcription start site region 127614
Tssr127615 14 20471444 to 20471461 17 - TSS region transcription start site region 127615
Tssr127616 14 20471533 to 20471563 30 - TSS region transcription start site region 127616
Tssr127617 14 20473305 to 20473345 40 - TSS region transcription start site region 127617
Cpgi6203 14 20479536 to 20480111 575 CpG island CpG island 6203
Tssr127618 14 20479862 to 20479869 7 - TSS region transcription start site region 127618
Tssr127619 14 20479907 to 20479914 7 - TSS region transcription start site region 127619
Tssr127620 14 20479929 to 20479968 39 - TSS region transcription start site region 127620
Tssr127621 14 20480076 to 20480079 3 - TSS region transcription start site region 127621
Tssr127622 14 20480106 to 20480114 8 - TSS region transcription start site region 127622
Mss51 14 20482867 to 20496901 14034 - protein coding gene MSS51 mitochondrial translational activator
Tssr127623 14 20496670 to 20496686 16 - TSS region transcription start site region 127623
Tssr127624 14 20496710 to 20496724 14 - TSS region transcription start site region 127624
Tssr127625 14 20496729 to 20496736 7 - TSS region transcription start site region 127625
Tssr127626 14 20496780 to 20496787 7 - TSS region transcription start site region 127626
Ppp3cb 14 20499364 to 20546573 47209 - protein coding gene protein phosphatase 3, catalytic subunit, beta isoform
Tssr127627 14 20501087 to 20501100 13 - TSS region transcription start site region 127627
Tssr127628 14 20531845 to 20531867 22 - TSS region transcription start site region 127628
Tssr127629 14 20538177 to 20538181 4 - TSS region transcription start site region 127629
Tssr127630 14 20544687 to 20544697 10 - TSS region transcription start site region 127630
2510010E17Rik 14 20545309 to 20546166 857 unclassified gene RIKEN cDNA 2510010E17 gene
Cpgi6204 14 20545709 to 20546774 1065 CpG island CpG island 6204
Tssr124381 14 20546157 to 20546161 4 + TSS region transcription start site region 124381
1810062O18Rik 14 20546293 to 20570680 24387 + antisense lncRNA gene RIKEN cDNA 1810062O18 gene
Tssr127631 14 20546462 to 20546481 19 - TSS region transcription start site region 127631
Tssr127632 14 20546482 to 20546485 3 - TSS region transcription start site region 127632
Tssr127633 14 20546517 to 20546582 65 - TSS region transcription start site region 127633
Usp54 14 20548912 to 20641063 92151 - protein coding gene ubiquitin specific peptidase 54
Tssr127634 14 20571205 to 20571210 5 - TSS region transcription start site region 127634
Tssr127635 14 20607871 to 20607900 29 - TSS region transcription start site region 127635
Tssr127636 14 20610279 to 20610305 26 - TSS region transcription start site region 127636
Tssr127637 14 20615514 to 20615520 6 - TSS region transcription start site region 127637
Tssr127638 14 20618313 to 20618334 21 - TSS region transcription start site region 127638
Tssr127639 14 20618339 to 20618365 26 - TSS region transcription start site region 127639
Tssr127640 14 20631355 to 20631368 13 - TSS region transcription start site region 127640
Tssr127641 14 20631731 to 20631735 4 - TSS region transcription start site region 127641
Cpgi6205 14 20640333 to 20641418 1085 CpG island CpG island 6205
Tssr127642 14 20640932 to 20640949 17 - TSS region transcription start site region 127642
Tssr127643 14 20640954 to 20640986 32 - TSS region transcription start site region 127643
Tssr124382 14 20640994 to 20641021 27 + TSS region transcription start site region 124382
2810402E24Rik 14 20641009 to 20644048 3039 + antisense lncRNA gene RIKEN cDNA 2810402E24 gene
Tssr124383 14 20641025 to 20641044 19 + TSS region transcription start site region 124383
Tssr124384 14 20641061 to 20641089 28 + TSS region transcription start site region 124384
Myoz1 14 20649107 to 20656540 7433 - protein coding gene myozenin 1
Tssr124385 14 20655241 to 20655273 32 + TSS region transcription start site region 124385
Tssr127644 14 20656488 to 20656508 20 - TSS region transcription start site region 127644
Synpo2l 14 20658946 to 20668354 9408 - protein coding gene synaptopodin 2-like
Cpgi6206 14 20660785 to 20661738 953 CpG island CpG island 6206
Tssr127645 14 20660871 to 20660888 17 - TSS region transcription start site region 127645
Tssr127646 14 20663652 to 20663671 19 - TSS region transcription start site region 127646
Tssr127647 14 20663687 to 20663696 9 - TSS region transcription start site region 127647
Tssr127648 14 20664480 to 20664551 71 - TSS region transcription start site region 127648
Tssr127649 14 20664562 to 20664580 18 - TSS region transcription start site region 127649
Tssr127650 14 20664582 to 20664588 6 - TSS region transcription start site region 127650
Tssr127651 14 20668256 to 20668267 11 - TSS region transcription start site region 127651
Tssr127652 14 20668269 to 20668324 55 - TSS region transcription start site region 127652