Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:18301900-19331912

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ube2e1 14 18282726 to 18331844 49118 - protein coding gene ubiquitin-conjugating enzyme E2E 1
Gm41098 14 18297678 to 18309834 12156 - lncRNA gene predicted gene, 41098
Cpgi6190 14 18326967 to 18327429 462 CpG island CpG island 6190
Tssr124362 14 18330038 to 18330040 2 + TSS region transcription start site region 124362
Cpgi6191 14 18330813 to 18332107 1294 CpG island CpG island 6191
Tssr127529 14 18331099 to 18331113 14 - TSS region transcription start site region 127529
Tssr4257 14 18331148 to 18331170 22 + TSS region transcription start site region 4257
Tssr127530 14 18331737 to 18331751 14 - TSS region transcription start site region 127530
Tssr127531 14 18331768 to 18331836 68 - TSS region transcription start site region 127531
Tssr127532 14 18331855 to 18331862 7 - TSS region transcription start site region 127532
Tssr127533 14 18332045 to 18332064 19 - TSS region transcription start site region 127533
Gm22350 14 18445875 to 18446030 155 + snRNA gene predicted gene, 22350
Gm32587 14 18463610 to 18555034 91424 + lncRNA gene predicted gene, 32587
Gm38620 14 18494159 to 18504615 10456 + lncRNA gene predicted gene, 38620
Tssr124363 14 18531323 to 18531354 31 + TSS region transcription start site region 124363
Gm6781 14 18531363 to 18532604 1241 + pseudogene predicted gene 6781
Gm4939 14 18543808 to 18545132 1324 - pseudogene predicted gene 4939
Tssr127534 14 18545317 to 18545330 13 - TSS region transcription start site region 127534
Tssr4258 14 18545338 to 18545368 30 - TSS region transcription start site region 4258
Ube2e2 14 18573575 to 18894267 320692 - protein coding gene ubiquitin-conjugating enzyme E2E 2
Tssr127535 14 18665140 to 18665156 16 - TSS region transcription start site region 127535
6820402I19Rik 14 18699826 to 18701946 2120 unclassified gene RIKEN cDNA 6820402I19 gene
Tssr127536 14 18703929 to 18703933 4 - TSS region transcription start site region 127536
Tssr127537 14 18709647 to 18709675 28 - TSS region transcription start site region 127537
D14Mit46 14 18780954 to 18781083 129 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 46
Gm22499 14 18814169 to 18814303 134 + snoRNA gene predicted gene, 22499
Tssr127538 14 18816900 to 18816912 12 - TSS region transcription start site region 127538
Gm15916 14 18831296 to 18832031 735 + pseudogene predicted gene 15916
Tssr127539 14 18868954 to 18868970 16 - TSS region transcription start site region 127539
Cpgi6192 14 18893060 to 18894333 1273 CpG island CpG island 6192
Tssr127540 14 18893376 to 18893420 44 - TSS region transcription start site region 127540
Tssr127541 14 18893623 to 18893647 24 - TSS region transcription start site region 127541
Tssr127542 14 18893664 to 18893717 53 - TSS region transcription start site region 127542
Tssr127543 14 18893749 to 18893816 67 - TSS region transcription start site region 127543
Tssr127544 14 18894255 to 18894282 27 - TSS region transcription start site region 127544
Tssr127545 14 18896720 to 18896725 5 - TSS region transcription start site region 127545
Gm6785 14 19014762 to 19015937 1175 - pseudogene predicted gene 6785
Gm3778 14 19016769 to 19024591 7822 + pseudogene predicted gene 3778
Gm34440 14 19035852 to 19036352 500 + pseudogene predicted gene, 34440
Cpgi6193 14 19041966 to 19042747 781 CpG island CpG island 6193
Gm41099 14 19042216 to 19087764 45548 + protein coding gene predicted gene, 41099
Gm48781 14 19043184 to 19043425 241 + pseudogene predicted gene, 48781
Gm48782 14 19059945 to 19061823 1878 - pseudogene predicted gene, 48782
Gm18275 14 19102467 to 19104133 1666 + pseudogene predicted gene, 18275
Gm7089 14 19107435 to 19108900 1465 - pseudogene predicted gene 7089
Gm48785 14 19116429 to 19116924 495 - pseudogene predicted gene, 48785
Tssr124364 14 19127756 to 19127777 21 + TSS region transcription start site region 124364
Gm8582 14 19127800 to 19132109 4309 + pseudogene predicted gene 8582
Tssr124365 14 19133106 to 19133114 8 + TSS region transcription start site region 124365
Gm8584 14 19159695 to 19164408 4713 + pseudogene predicted gene 8584
Gm48098 14 19263216 to 19263497 281 + pseudogene predicted gene, 48098
Gm48099 14 19271274 to 19282822 11548 + lincRNA gene predicted gene, 48099
Tssr124366 14 19277972 to 19277991 19 + TSS region transcription start site region 124366
Tssr124367 14 19278148 to 19278179 31 + TSS region transcription start site region 124367
Tssr127546 14 19278190 to 19278199 9 - TSS region transcription start site region 127546
Gm6122 14 19290531 to 19291209 678 - pseudogene predicted gene 6122
Gm33022 14 19292162 to 19292529 367 - lncRNA gene predicted gene, 33022