Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:17807045-18857064

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prdt6 14 16430839 to 18038090 1607251 QTL prion disease incubation time 6
Thrb 14 17660261 to 18038090 377829 + protein coding gene thyroid hormone receptor beta
Tssr4256 14 17847410 to 17847430 20 + TSS region transcription start site region 4256
Gm24140 14 17884808 to 17885133 325 - unclassified non-coding RNA gene predicted gene, 24140
Gm48321 14 17931138 to 18021909 90771 - antisense lncRNA gene predicted gene, 48321
Tssr124350 14 17945212 to 17945220 8 + TSS region transcription start site region 124350
Tssr124351 14 17962801 to 17962821 20 + TSS region transcription start site region 124351
Tssr124352 14 17981506 to 17981509 3 + TSS region transcription start site region 124352
Tssr124353 14 17981633 to 17981639 6 + TSS region transcription start site region 124353
Tssr124354 14 17981813 to 17981820 7 + TSS region transcription start site region 124354
Tssr124355 14 17981867 to 17981876 9 + TSS region transcription start site region 124355
Tssr124356 14 17981888 to 17981900 12 + TSS region transcription start site region 124356
Tssr127523 14 18021888 to 18021914 26 - TSS region transcription start site region 127523
Tssr124357 14 18030722 to 18030726 4 + TSS region transcription start site region 124357
Tssr124358 14 18034343 to 18034347 4 + TSS region transcription start site region 124358
Gm27851 14 18060275 to 18060337 62 + snRNA gene predicted gene, 27851
Gm19290 14 18095724 to 18096034 310 + pseudogene predicted gene, 19290
Gm6773 14 18099183 to 18100060 877 - pseudogene predicted gene 6773
Gm48481 14 18189040 to 18189554 514 + pseudogene predicted gene, 48481
Gm44469 14 18200675 to 18200753 78 + miRNA gene predicted gene, 44469
Nr1d2 14 18204056 to 18239106 35050 - protein coding gene nuclear receptor subfamily 1, group D, member 2
Cpgi6187 14 18238128 to 18239573 1445 CpG island CpG island 6187
Tssr127524 14 18238952 to 18239036 84 - TSS region transcription start site region 127524
Tssr127525 14 18239053 to 18239098 45 - TSS region transcription start site region 127525
Gm7084 14 18242422 to 18243253 831 + pseudogene predicted gene 7084
Cpgi6188 14 18242788 to 18242956 168 CpG island CpG island 6188
Rpl15 14 18267823 to 18271024 3201 - protein coding gene ribosomal protein L15
Cpgi6189 14 18270064 to 18271551 1487 CpG island CpG island 6189
Tssr127526 14 18270953 to 18270991 38 - TSS region transcription start site region 127526
Tssr127527 14 18271064 to 18271075 11 - TSS region transcription start site region 127527
Tssr124359 14 18271122 to 18271178 56 + TSS region transcription start site region 124359
Nkiras1 14 18271136 to 18284003 12867 + protein coding gene NFKB inhibitor interacting Ras-like protein 1
Tssr127528 14 18271191 to 18271205 14 - TSS region transcription start site region 127528
Tssr124360 14 18271201 to 18271290 89 + TSS region transcription start site region 124360
Tssr124361 14 18271308 to 18271321 13 + TSS region transcription start site region 124361
Ube2e1 14 18282726 to 18331844 49118 - protein coding gene ubiquitin-conjugating enzyme E2E 1
Gm41098 14 18297678 to 18309834 12156 - lncRNA gene predicted gene, 41098
Cpgi6190 14 18326967 to 18327429 462 CpG island CpG island 6190
Tssr124362 14 18330038 to 18330040 2 + TSS region transcription start site region 124362
Cpgi6191 14 18330813 to 18332107 1294 CpG island CpG island 6191
Tssr127529 14 18331099 to 18331113 14 - TSS region transcription start site region 127529
Tssr4257 14 18331148 to 18331170 22 + TSS region transcription start site region 4257
Tssr127530 14 18331737 to 18331751 14 - TSS region transcription start site region 127530
Tssr127531 14 18331768 to 18331836 68 - TSS region transcription start site region 127531
Tssr127532 14 18331855 to 18331862 7 - TSS region transcription start site region 127532
Tssr127533 14 18332045 to 18332064 19 - TSS region transcription start site region 127533
Gm22350 14 18445875 to 18446030 155 + snRNA gene predicted gene, 22350
Gm32587 14 18463610 to 18555034 91424 + lncRNA gene predicted gene, 32587
Gm38620 14 18494159 to 18504615 10456 + lncRNA gene predicted gene, 38620
Tssr124363 14 18531323 to 18531354 31 + TSS region transcription start site region 124363
Gm6781 14 18531363 to 18532604 1241 + pseudogene predicted gene 6781
Gm4939 14 18543808 to 18545132 1324 - pseudogene predicted gene 4939
Tssr127534 14 18545317 to 18545330 13 - TSS region transcription start site region 127534
Tssr4258 14 18545338 to 18545368 30 - TSS region transcription start site region 4258
Ube2e2 14 18573575 to 18894267 320692 - protein coding gene ubiquitin-conjugating enzyme E2E 2
Tssr127535 14 18665140 to 18665156 16 - TSS region transcription start site region 127535
6820402I19Rik 14 18699826 to 18701946 2120 unclassified gene RIKEN cDNA 6820402I19 gene
Tssr127536 14 18703929 to 18703933 4 - TSS region transcription start site region 127536
Tssr127537 14 18709647 to 18709675 28 - TSS region transcription start site region 127537
D14Mit46 14 18780954 to 18781083 129 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 46
Gm22499 14 18814169 to 18814303 134 + snoRNA gene predicted gene, 22499
Tssr127538 14 18816900 to 18816912 12 - TSS region transcription start site region 127538
Gm15916 14 18831296 to 18832031 735 + pseudogene predicted gene 15916