Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:16541503-17702100

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rarb 14 16430839 to 16819156 388317 - protein coding gene retinoic acid receptor, beta
Cpgi6183 14 16575029 to 16575966 937 CpG island CpG island 6183
Tssr127514 14 16575035 to 16575061 26 - TSS region transcription start site region 127514
Tssr127515 14 16575157 to 16575170 13 - TSS region transcription start site region 127515
Tssr127516 14 16575343 to 16575361 18 - TSS region transcription start site region 127516
Tssr127517 14 16575364 to 16575412 48 - TSS region transcription start site region 127517
Tssr127518 14 16575456 to 16575501 45 - TSS region transcription start site region 127518
Tssr127519 14 16575508 to 16575529 21 - TSS region transcription start site region 127519
Tssr127520 14 16575538 to 16575559 21 - TSS region transcription start site region 127520
Gm48162 14 16575601 to 16580459 4858 + antisense lncRNA gene predicted gene, 48162
Tssr124336 14 16575629 to 16575634 5 + TSS region transcription start site region 124336
D14Mit78 14 16575929 to 16576061 132 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 78
Gm19061 14 16633191 to 16634951 1760 + pseudogene predicted gene, 19061
Tssr124337 14 16946647 to 16946650 3 + TSS region transcription start site region 124337
Tpi-rs9 14 16946659 to 16947433 774 + pseudogene triosephosphate isomerase related sequence 9
Gm18078 14 16953606 to 16954197 591 + pseudogene predicted gene, 18078
Gm18927 14 17105561 to 17105876 315 + pseudogene predicted gene, 18927
Gm48312 14 17121503 to 17122100 597 + pseudogene predicted gene, 48312
Cpgi6184 14 17172484 to 17173190 706 CpG island CpG island 6184
Tssr127521 14 17172856 to 17172880 24 - TSS region transcription start site region 127521
Tssr127522 14 17172882 to 17172910 28 - TSS region transcription start site region 127522
D14Mit99 14 17255111 to 17255232 121 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 99
Gm32121 14 17330675 to 17407786 77111 - lncRNA gene predicted gene, 32121
Gm32187 14 17517932 to 17527015 9083 - lncRNA gene predicted gene, 32187
Gm32269 14 17598389 to 17660355 61966 - lncRNA gene predicted gene, 32269
Cpgi6185 14 17633027 to 17633244 217 CpG island CpG island 6185
Tssr124338 14 17659199 to 17659216 17 + TSS region transcription start site region 124338
Tssr124339 14 17659227 to 17659238 11 + TSS region transcription start site region 124339
Tssr124340 14 17659249 to 17659277 28 + TSS region transcription start site region 124340
Tssr124341 14 17659278 to 17659296 18 + TSS region transcription start site region 124341
Tssr4255 14 17659576 to 17659582 6 + TSS region transcription start site region 4255
Tssr124342 14 17659763 to 17659779 16 + TSS region transcription start site region 124342
Cpgi6186 14 17659787 to 17661454 1667 CpG island CpG island 6186
Tssr124343 14 17659793 to 17659802 9 + TSS region transcription start site region 124343
Tssr124344 14 17659807 to 17659818 11 + TSS region transcription start site region 124344
Thrb 14 17660261 to 18038090 377829 + protein coding gene thyroid hormone receptor beta
Tssr124345 14 17660872 to 17660950 78 + TSS region transcription start site region 124345
Tssr124346 14 17660956 to 17660963 7 + TSS region transcription start site region 124346
Tssr124347 14 17660966 to 17660980 14 + TSS region transcription start site region 124347
D14Mit220 14 17698811 to 17699105 294 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 220