Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:16496503-17747100

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rarb 14 16430839 to 16819156 388317 - protein coding gene retinoic acid receptor, beta
D14Mit98.1 14 16523604 to 16523742 138 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 98.1
Appd2 14 16523711 to 30392905 13869194 QTL APP associated premature death 2
D14Mit98 14 16523711 to 16523860 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 98
Cpgi6183 14 16575029 to 16575966 937 CpG island CpG island 6183
Tssr127514 14 16575035 to 16575061 26 - TSS region transcription start site region 127514
Tssr127515 14 16575157 to 16575170 13 - TSS region transcription start site region 127515
Tssr127516 14 16575343 to 16575361 18 - TSS region transcription start site region 127516
Tssr127517 14 16575364 to 16575412 48 - TSS region transcription start site region 127517
Tssr127518 14 16575456 to 16575501 45 - TSS region transcription start site region 127518
Tssr127519 14 16575508 to 16575529 21 - TSS region transcription start site region 127519
Tssr127520 14 16575538 to 16575559 21 - TSS region transcription start site region 127520
Gm48162 14 16575601 to 16580459 4858 + antisense lncRNA gene predicted gene, 48162
Tssr124336 14 16575629 to 16575634 5 + TSS region transcription start site region 124336
D14Mit78 14 16575929 to 16576061 132 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 78
Gm19061 14 16633191 to 16634951 1760 + pseudogene predicted gene, 19061
Tssr124337 14 16946647 to 16946650 3 + TSS region transcription start site region 124337
Tpi-rs9 14 16946659 to 16947433 774 + pseudogene triosephosphate isomerase related sequence 9
Gm18078 14 16953606 to 16954197 591 + pseudogene predicted gene, 18078
Gm18927 14 17105561 to 17105876 315 + pseudogene predicted gene, 18927
Gm48312 14 17121503 to 17122100 597 + pseudogene predicted gene, 48312
Cpgi6184 14 17172484 to 17173190 706 CpG island CpG island 6184
Tssr127521 14 17172856 to 17172880 24 - TSS region transcription start site region 127521
Tssr127522 14 17172882 to 17172910 28 - TSS region transcription start site region 127522
D14Mit99 14 17255111 to 17255232 121 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 99
Gm32121 14 17330675 to 17407786 77111 - lncRNA gene predicted gene, 32121
Gm32187 14 17517932 to 17527015 9083 - lncRNA gene predicted gene, 32187
Gm32269 14 17598389 to 17660355 61966 - lncRNA gene predicted gene, 32269
Cpgi6185 14 17633027 to 17633244 217 CpG island CpG island 6185
Tssr124338 14 17659199 to 17659216 17 + TSS region transcription start site region 124338
Tssr124339 14 17659227 to 17659238 11 + TSS region transcription start site region 124339
Tssr124340 14 17659249 to 17659277 28 + TSS region transcription start site region 124340
Tssr124341 14 17659278 to 17659296 18 + TSS region transcription start site region 124341
Tssr4255 14 17659576 to 17659582 6 + TSS region transcription start site region 4255
Tssr124342 14 17659763 to 17659779 16 + TSS region transcription start site region 124342
Cpgi6186 14 17659787 to 17661454 1667 CpG island CpG island 6186
Tssr124343 14 17659793 to 17659802 9 + TSS region transcription start site region 124343
Tssr124344 14 17659807 to 17659818 11 + TSS region transcription start site region 124344
Thrb 14 17660261 to 18038090 377829 + protein coding gene thyroid hormone receptor beta
Tssr124345 14 17660872 to 17660950 78 + TSS region transcription start site region 124345
Tssr124346 14 17660956 to 17660963 7 + TSS region transcription start site region 124346
Tssr124347 14 17660966 to 17660980 14 + TSS region transcription start site region 124347
D14Mit220 14 17698811 to 17699105 294 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 220
Tssr124348 14 17727396 to 17727401 5 + TSS region transcription start site region 124348