Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:16069151-22769183

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771 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
sky 14 12481829 to 21012571 8530742 heritable phenotypic marker severe kyphosis
Gm8517 14 16171397 to 16172608 1211 + pseudogene predicted gene 8517
Tssr127504 14 16172446 to 16172465 19 - TSS region transcription start site region 127504
Tssr127505 14 16172466 to 16172488 22 - TSS region transcription start site region 127505
Tssr127506 14 16172492 to 16172509 17 - TSS region transcription start site region 127506
Tssr127507 14 16173320 to 16173321 1 - TSS region transcription start site region 127507
Tssr124328 14 16173680 to 16173696 16 + TSS region transcription start site region 124328
Tssr124329 14 16224993 to 16224998 5 + TSS region transcription start site region 124329
Rpl31-ps3 14 16225023 to 16225370 347 + pseudogene ribosomal protein L31, pseudogene 3
Oxsm 14 16238659 to 16249808 11149 - protein coding gene 3-oxoacyl-ACP synthase, mitochondrial
Cpgi6180 14 16242997 to 16243554 557 CpG island CpG island 6180
Tssr127508 14 16243309 to 16243344 35 - TSS region transcription start site region 127508
Gm47794 14 16243351 to 16245091 1740 + antisense lncRNA gene predicted gene, 47794
Cpgi6181 14 16249106 to 16249859 753 CpG island CpG island 6181
Tssr127509 14 16249154 to 16249182 28 - TSS region transcription start site region 127509
Tssr124330 14 16249259 to 16249366 107 + TSS region transcription start site region 124330
Ngly1 14 16249314 to 16311926 62612 + protein coding gene N-glycanase 1
Tssr127510 14 16249675 to 16249689 14 - TSS region transcription start site region 127510
Tssr124331 14 16253880 to 16253882 2 + TSS region transcription start site region 124331
5430414B19Rik 14 16271089 to 16271838 749 + sense intronic lncRNA gene RIKEN cDNA 5430414B19 gene
Gm47797 14 16273995 to 16274321 326 + unclassified gene predicted gene, 47797
Gm47798 14 16304511 to 16308325 3814 + sense intronic lncRNA gene predicted gene, 47798
Gm48163 14 16336846 to 16366268 29422 - antisense lncRNA gene predicted gene, 48163
Cpgi6182 14 16364513 to 16366335 1822 CpG island CpG island 6182
Tssr124332 14 16365171 to 16365194 23 + TSS region transcription start site region 124332
Top2b 14 16365206 to 16430787 65581 + protein coding gene topoisomerase (DNA) II beta
D14Mit244 14 16380024 to 16380164 140 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-244
Tssr124333 14 16388388 to 16388401 13 + TSS region transcription start site region 124333
Tssr124334 14 16398724 to 16398730 6 + TSS region transcription start site region 124334
Tssr124335 14 16410246 to 16410254 8 + TSS region transcription start site region 124335
Rarb 14 16430839 to 16819156 388317 - protein coding gene retinoic acid receptor, beta
Prdt6 14 16430839 to 18038090 1607251 QTL prion disease incubation time 6
Tssr127511 14 16447089 to 16447105 16 - TSS region transcription start site region 127511
Gm46442 14 16451704 to 16452228 524 - pseudogene predicted gene, 46442
Tssr4254 14 16457173 to 16457175 2 + TSS region transcription start site region 4254
Tssr127512 14 16466709 to 16466712 3 - TSS region transcription start site region 127512
Tssr127513 14 16491083 to 16491095 12 - TSS region transcription start site region 127513
D14Mit98.1 14 16523604 to 16523742 138 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 98.1
Appd2 14 16523711 to 30392905 13869194 QTL APP associated premature death 2
D14Mit98 14 16523711 to 16523860 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 98
Cpgi6183 14 16575029 to 16575966 937 CpG island CpG island 6183
Tssr127514 14 16575035 to 16575061 26 - TSS region transcription start site region 127514
Tssr127515 14 16575157 to 16575170 13 - TSS region transcription start site region 127515
Tssr127516 14 16575343 to 16575361 18 - TSS region transcription start site region 127516
Tssr127517 14 16575364 to 16575412 48 - TSS region transcription start site region 127517
Tssr127518 14 16575456 to 16575501 45 - TSS region transcription start site region 127518
Tssr127519 14 16575508 to 16575529 21 - TSS region transcription start site region 127519
Tssr127520 14 16575538 to 16575559 21 - TSS region transcription start site region 127520
Gm48162 14 16575601 to 16580459 4858 + antisense lncRNA gene predicted gene, 48162
Tssr124336 14 16575629 to 16575634 5 + TSS region transcription start site region 124336
D14Mit78 14 16575929 to 16576061 132 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 78
Gm19061 14 16633191 to 16634951 1760 + pseudogene predicted gene, 19061
Tssr124337 14 16946647 to 16946650 3 + TSS region transcription start site region 124337
Tpi-rs9 14 16946659 to 16947433 774 + pseudogene triosephosphate isomerase related sequence 9
Gm18078 14 16953606 to 16954197 591 + pseudogene predicted gene, 18078
Gm18927 14 17105561 to 17105876 315 + pseudogene predicted gene, 18927
Gm48312 14 17121503 to 17122100 597 + pseudogene predicted gene, 48312
Cpgi6184 14 17172484 to 17173190 706 CpG island CpG island 6184
Tssr127521 14 17172856 to 17172880 24 - TSS region transcription start site region 127521
Tssr127522 14 17172882 to 17172910 28 - TSS region transcription start site region 127522
D14Mit99 14 17255111 to 17255232 121 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 99
Gm32121 14 17330675 to 17407786 77111 - lncRNA gene predicted gene, 32121
Gm32187 14 17517932 to 17527015 9083 - lncRNA gene predicted gene, 32187
Gm32269 14 17598389 to 17660355 61966 - lncRNA gene predicted gene, 32269
Cpgi6185 14 17633027 to 17633244 217 CpG island CpG island 6185
Tssr124338 14 17659199 to 17659216 17 + TSS region transcription start site region 124338
Tssr124339 14 17659227 to 17659238 11 + TSS region transcription start site region 124339
Tssr124340 14 17659249 to 17659277 28 + TSS region transcription start site region 124340
Tssr124341 14 17659278 to 17659296 18 + TSS region transcription start site region 124341
Tssr4255 14 17659576 to 17659582 6 + TSS region transcription start site region 4255
Tssr124342 14 17659763 to 17659779 16 + TSS region transcription start site region 124342
Cpgi6186 14 17659787 to 17661454 1667 CpG island CpG island 6186
Tssr124343 14 17659793 to 17659802 9 + TSS region transcription start site region 124343
Tssr124344 14 17659807 to 17659818 11 + TSS region transcription start site region 124344
Thrb 14 17660261 to 18038090 377829 + protein coding gene thyroid hormone receptor beta
Tssr124345 14 17660872 to 17660950 78 + TSS region transcription start site region 124345
Tssr124346 14 17660956 to 17660963 7 + TSS region transcription start site region 124346
Tssr124347 14 17660966 to 17660980 14 + TSS region transcription start site region 124347
D14Mit220 14 17698811 to 17699105 294 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 220
Tssr124348 14 17727396 to 17727401 5 + TSS region transcription start site region 124348
Gm48320 14 17770649 to 17771122 473 - pseudogene predicted gene, 48320
Tssr124349 14 17784648 to 17784674 26 + TSS region transcription start site region 124349
Tssr4256 14 17847410 to 17847430 20 + TSS region transcription start site region 4256
Gm24140 14 17884808 to 17885133 325 - unclassified non-coding RNA gene predicted gene, 24140
Gm48321 14 17931138 to 18021909 90771 - antisense lncRNA gene predicted gene, 48321
Tssr124350 14 17945212 to 17945220 8 + TSS region transcription start site region 124350
Tssr124351 14 17962801 to 17962821 20 + TSS region transcription start site region 124351
Tssr124352 14 17981506 to 17981509 3 + TSS region transcription start site region 124352
Tssr124353 14 17981633 to 17981639 6 + TSS region transcription start site region 124353
Tssr124354 14 17981813 to 17981820 7 + TSS region transcription start site region 124354
Tssr124355 14 17981867 to 17981876 9 + TSS region transcription start site region 124355
Tssr124356 14 17981888 to 17981900 12 + TSS region transcription start site region 124356
Tssr127523 14 18021888 to 18021914 26 - TSS region transcription start site region 127523
Tssr124357 14 18030722 to 18030726 4 + TSS region transcription start site region 124357
Tssr124358 14 18034343 to 18034347 4 + TSS region transcription start site region 124358
Gm27851 14 18060275 to 18060337 62 + snRNA gene predicted gene, 27851
Gm19290 14 18095724 to 18096034 310 + pseudogene predicted gene, 19290
Gm6773 14 18099183 to 18100060 877 - pseudogene predicted gene 6773
Gm48481 14 18189040 to 18189554 514 + pseudogene predicted gene, 48481
Gm44469 14 18200675 to 18200753 78 + miRNA gene predicted gene, 44469
Nr1d2 14 18204056 to 18239106 35050 - protein coding gene nuclear receptor subfamily 1, group D, member 2
Cpgi6187 14 18238128 to 18239573 1445 CpG island CpG island 6187
Tssr127524 14 18238952 to 18239036 84 - TSS region transcription start site region 127524
Tssr127525 14 18239053 to 18239098 45 - TSS region transcription start site region 127525
Gm7084 14 18242422 to 18243253 831 + pseudogene predicted gene 7084
Cpgi6188 14 18242788 to 18242956 168 CpG island CpG island 6188
Rpl15 14 18267823 to 18271024 3201 - protein coding gene ribosomal protein L15
Cpgi6189 14 18270064 to 18271551 1487 CpG island CpG island 6189
Tssr127526 14 18270953 to 18270991 38 - TSS region transcription start site region 127526
Tssr127527 14 18271064 to 18271075 11 - TSS region transcription start site region 127527
Tssr124359 14 18271122 to 18271178 56 + TSS region transcription start site region 124359
Nkiras1 14 18271136 to 18284003 12867 + protein coding gene NFKB inhibitor interacting Ras-like protein 1
Tssr127528 14 18271191 to 18271205 14 - TSS region transcription start site region 127528
Tssr124360 14 18271201 to 18271290 89 + TSS region transcription start site region 124360
Tssr124361 14 18271308 to 18271321 13 + TSS region transcription start site region 124361
Ube2e1 14 18282726 to 18331844 49118 - protein coding gene ubiquitin-conjugating enzyme E2E 1
Gm41098 14 18297678 to 18309834 12156 - lncRNA gene predicted gene, 41098
Cpgi6190 14 18326967 to 18327429 462 CpG island CpG island 6190
Tssr124362 14 18330038 to 18330040 2 + TSS region transcription start site region 124362
Cpgi6191 14 18330813 to 18332107 1294 CpG island CpG island 6191
Tssr127529 14 18331099 to 18331113 14 - TSS region transcription start site region 127529
Tssr4257 14 18331148 to 18331170 22 + TSS region transcription start site region 4257
Tssr127530 14 18331737 to 18331751 14 - TSS region transcription start site region 127530
Tssr127531 14 18331768 to 18331836 68 - TSS region transcription start site region 127531
Tssr127532 14 18331855 to 18331862 7 - TSS region transcription start site region 127532
Tssr127533 14 18332045 to 18332064 19 - TSS region transcription start site region 127533
Gm22350 14 18445875 to 18446030 155 + snRNA gene predicted gene, 22350
Gm32587 14 18463610 to 18555034 91424 + lncRNA gene predicted gene, 32587
Gm38620 14 18494159 to 18504615 10456 + lncRNA gene predicted gene, 38620
Tssr124363 14 18531323 to 18531354 31 + TSS region transcription start site region 124363
Gm6781 14 18531363 to 18532604 1241 + pseudogene predicted gene 6781
Gm4939 14 18543808 to 18545132 1324 - pseudogene predicted gene 4939
Tssr127534 14 18545317 to 18545330 13 - TSS region transcription start site region 127534
Tssr4258 14 18545338 to 18545368 30 - TSS region transcription start site region 4258
Ube2e2 14 18573575 to 18894267 320692 - protein coding gene ubiquitin-conjugating enzyme E2E 2
Tssr127535 14 18665140 to 18665156 16 - TSS region transcription start site region 127535
6820402I19Rik 14 18699826 to 18701946 2120 unclassified gene RIKEN cDNA 6820402I19 gene
Tssr127536 14 18703929 to 18703933 4 - TSS region transcription start site region 127536
Tssr127537 14 18709647 to 18709675 28 - TSS region transcription start site region 127537
D14Mit46 14 18780954 to 18781083 129 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 46
Gm22499 14 18814169 to 18814303 134 + snoRNA gene predicted gene, 22499
Tssr127538 14 18816900 to 18816912 12 - TSS region transcription start site region 127538
Gm15916 14 18831296 to 18832031 735 + pseudogene predicted gene 15916
Tssr127539 14 18868954 to 18868970 16 - TSS region transcription start site region 127539
Cpgi6192 14 18893060 to 18894333 1273 CpG island CpG island 6192
Tssr127540 14 18893376 to 18893420 44 - TSS region transcription start site region 127540
Tssr127541 14 18893623 to 18893647 24 - TSS region transcription start site region 127541
Tssr127542 14 18893664 to 18893717 53 - TSS region transcription start site region 127542
Tssr127543 14 18893749 to 18893816 67 - TSS region transcription start site region 127543
Tssr127544 14 18894255 to 18894282 27 - TSS region transcription start site region 127544
Tssr127545 14 18896720 to 18896725 5 - TSS region transcription start site region 127545
Gm6785 14 19014762 to 19015937 1175 - pseudogene predicted gene 6785
Gm3778 14 19016769 to 19024591 7822 + pseudogene predicted gene 3778
Gm34440 14 19035852 to 19036352 500 + pseudogene predicted gene, 34440
Cpgi6193 14 19041966 to 19042747 781 CpG island CpG island 6193
Gm41099 14 19042216 to 19087764 45548 + protein coding gene predicted gene, 41099
Gm48781 14 19043184 to 19043425 241 + pseudogene predicted gene, 48781
Gm48782 14 19059945 to 19061823 1878 - pseudogene predicted gene, 48782
Gm18275 14 19102467 to 19104133 1666 + pseudogene predicted gene, 18275
Gm7089 14 19107435 to 19108900 1465 - pseudogene predicted gene 7089
Gm48785 14 19116429 to 19116924 495 - pseudogene predicted gene, 48785
Tssr124364 14 19127756 to 19127777 21 + TSS region transcription start site region 124364
Gm8582 14 19127800 to 19132109 4309 + pseudogene predicted gene 8582
Tssr124365 14 19133106 to 19133114 8 + TSS region transcription start site region 124365
Gm8584 14 19159695 to 19164408 4713 + pseudogene predicted gene 8584
Gm48098 14 19263216 to 19263497 281 + pseudogene predicted gene, 48098
Gm48099 14 19271274 to 19282822 11548 + lincRNA gene predicted gene, 48099
Tssr124366 14 19277972 to 19277991 19 + TSS region transcription start site region 124366
Tssr124367 14 19278148 to 19278179 31 + TSS region transcription start site region 124367
Tssr127546 14 19278190 to 19278199 9 - TSS region transcription start site region 127546
Gm6122 14 19290531 to 19291209 678 - pseudogene predicted gene 6122
Gm33022 14 19292162 to 19292529 367 - lncRNA gene predicted gene, 33022
Gm5630 14 19350748 to 19351647 899 - pseudogene predicted pseudogene 5630
Gm9637 14 19401727 to 19402599 872 - pseudogene predicted gene 9637
Tssr4259 14 19415707 to 19415711 4 + TSS region transcription start site region 4259
Tssr4260 14 19415765 to 19415794 29 + TSS region transcription start site region 4260
Tssr4261 14 19415796 to 19415821 25 - TSS region transcription start site region 4261
Gm21738 14 19415857 to 19418930 3073 - protein coding gene predicted gene, 21738
Tssr4262 14 19415932 to 19415949 17 - TSS region transcription start site region 4262
Tssr4263 14 19416028 to 19416047 19 - TSS region transcription start site region 4263
Tssr4264 14 19416045 to 19416057 12 + TSS region transcription start site region 4264
Tssr4265 14 19416099 to 19416122 23 + TSS region transcription start site region 4265
Tssr4266 14 19416126 to 19416159 33 - TSS region transcription start site region 4266
Tssr4267 14 19416144 to 19416179 35 + TSS region transcription start site region 4267
Tssr4268 14 19416168 to 19416209 41 - TSS region transcription start site region 4268
Tssr4269 14 19416272 to 19416290 18 - TSS region transcription start site region 4269
Tssr4270 14 19416325 to 19416371 46 + TSS region transcription start site region 4270
Tssr4271 14 19416352 to 19416410 58 - TSS region transcription start site region 4271
Tssr4272 14 19416378 to 19416390 12 + TSS region transcription start site region 4272
Tssr4273 14 19416407 to 19416414 7 + TSS region transcription start site region 4273
Tssr4274 14 19416454 to 19416475 21 + TSS region transcription start site region 4274
Tssr4275 14 19416481 to 19416502 21 - TSS region transcription start site region 4275
Tssr4276 14 19416615 to 19416656 41 - TSS region transcription start site region 4276
Tssr4277 14 19416682 to 19416707 25 + TSS region transcription start site region 4277
Tssr4278 14 19416716 to 19416738 22 - TSS region transcription start site region 4278
Tssr4279 14 19416754 to 19416765 11 - TSS region transcription start site region 4279
Tssr4280 14 19416786 to 19416825 39 + TSS region transcription start site region 4280
Tssr4281 14 19416803 to 19416866 63 - TSS region transcription start site region 4281
Tssr4282 14 19416873 to 19416884 11 - TSS region transcription start site region 4282
Tssr4283 14 19416893 to 19416904 11 + TSS region transcription start site region 4283