Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:15983659-16504808

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700062C10Rik 14 16000816 to 16037265 36449 - lincRNA gene RIKEN cDNA 1700062C10 gene
Gm8517 14 16171397 to 16172608 1211 + pseudogene predicted gene 8517
Tssr127504 14 16172446 to 16172465 19 - TSS region transcription start site region 127504
Tssr127505 14 16172466 to 16172488 22 - TSS region transcription start site region 127505
Tssr127506 14 16172492 to 16172509 17 - TSS region transcription start site region 127506
Tssr127507 14 16173320 to 16173321 1 - TSS region transcription start site region 127507
Tssr124328 14 16173680 to 16173696 16 + TSS region transcription start site region 124328
Tssr124329 14 16224993 to 16224998 5 + TSS region transcription start site region 124329
Rpl31-ps3 14 16225023 to 16225370 347 + pseudogene ribosomal protein L31, pseudogene 3
Oxsm 14 16238659 to 16249808 11149 - protein coding gene 3-oxoacyl-ACP synthase, mitochondrial
Cpgi6180 14 16242997 to 16243554 557 CpG island CpG island 6180
Tssr127508 14 16243309 to 16243344 35 - TSS region transcription start site region 127508
Gm47794 14 16243351 to 16245091 1740 + antisense lncRNA gene predicted gene, 47794
Cpgi6181 14 16249106 to 16249859 753 CpG island CpG island 6181
Tssr127509 14 16249154 to 16249182 28 - TSS region transcription start site region 127509
Tssr124330 14 16249259 to 16249366 107 + TSS region transcription start site region 124330
Ngly1 14 16249314 to 16311926 62612 + protein coding gene N-glycanase 1
Tssr127510 14 16249675 to 16249689 14 - TSS region transcription start site region 127510
Tssr124331 14 16253880 to 16253882 2 + TSS region transcription start site region 124331
5430414B19Rik 14 16271089 to 16271838 749 + sense intronic lncRNA gene RIKEN cDNA 5430414B19 gene
Gm47797 14 16273995 to 16274321 326 + unclassified gene predicted gene, 47797
Gm47798 14 16304511 to 16308325 3814 + sense intronic lncRNA gene predicted gene, 47798
Gm48163 14 16336846 to 16366268 29422 - antisense lncRNA gene predicted gene, 48163
Cpgi6182 14 16364513 to 16366335 1822 CpG island CpG island 6182
Tssr124332 14 16365171 to 16365194 23 + TSS region transcription start site region 124332
Top2b 14 16365206 to 16430787 65581 + protein coding gene topoisomerase (DNA) II beta
D14Mit244 14 16380024 to 16380164 140 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-244
Tssr124333 14 16388388 to 16388401 13 + TSS region transcription start site region 124333
Tssr124334 14 16398724 to 16398730 6 + TSS region transcription start site region 124334
Tssr124335 14 16410246 to 16410254 8 + TSS region transcription start site region 124335
Rarb 14 16430839 to 16819156 388317 - protein coding gene retinoic acid receptor, beta
Prdt6 14 16430839 to 18038090 1607251 QTL prion disease incubation time 6
Tssr127511 14 16447089 to 16447105 16 - TSS region transcription start site region 127511
Gm46442 14 16451704 to 16452228 524 - pseudogene predicted gene, 46442
Tssr4254 14 16457173 to 16457175 2 + TSS region transcription start site region 4254
Tssr127512 14 16466709 to 16466712 3 - TSS region transcription start site region 127512
Tssr127513 14 16491083 to 16491095 12 - TSS region transcription start site region 127513