Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:14656331-16258041

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm19018 14 14659108 to 14659879 771 + pseudogene predicted gene, 19018
Tssr124311 14 14686399 to 14686432 33 + TSS region transcription start site region 124311
Tssr124312 14 14686798 to 14686837 39 + TSS region transcription start site region 124312
Cpgi6178 14 14702497 to 14703850 1353 CpG island CpG island 6178
Slc4a7 14 14703011 to 14799944 96933 + protein coding gene solute carrier family 4, sodium bicarbonate cotransporter, member 7
Tssr124313 14 14703042 to 14703073 31 + TSS region transcription start site region 124313
Tssr4251 14 14703089 to 14703092 3 + TSS region transcription start site region 4251
Tssr124314 14 14704057 to 14704061 4 + TSS region transcription start site region 124314
Tssr124315 14 14716976 to 14716980 4 + TSS region transcription start site region 124315
Tssr124316 14 14718775 to 14718789 14 + TSS region transcription start site region 124316
Tssr124317 14 14718826 to 14718829 3 + TSS region transcription start site region 124317
Tssr124318 14 14743444 to 14743506 62 + TSS region transcription start site region 124318
Tssr124319 14 14748312 to 14748318 6 + TSS region transcription start site region 124319
Tssr127495 14 14764554 to 14764563 9 - TSS region transcription start site region 127495
Tssr127496 14 14781325 to 14781351 26 - TSS region transcription start site region 127496
Nek10 14 14803580 to 15012059 208479 + protein coding gene NIMA (never in mitosis gene a)- related kinase 10
Tssr124320 14 14804133 to 14804144 11 + TSS region transcription start site region 124320
Tssr4252 14 14893408 to 14893411 3 + TSS region transcription start site region 4252
Tssr124321 14 14963539 to 14963543 4 + TSS region transcription start site region 124321
Gm46441 14 15011662 to 15027397 15735 - lncRNA gene predicted gene, 46441
Gm18142 14 15040807 to 15042169 1362 - pseudogene predicted gene, 18142
Gm31517 14 15053321 to 15065207 11886 - lincRNA gene predicted gene, 31517
Gm47743 14 15063032 to 15065425 2393 + unclassified gene predicted gene, 47743
D14Mit48 14 15081581 to 15081699 118 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 48
4921522A10Rik 14 15104124 to 15110333 6209 - lincRNA gene RIKEN cDNA 4921522A10 gene
Tssr124322 14 15110446 to 15110451 5 + TSS region transcription start site region 124322
Gm47756 14 15118313 to 15120977 2664 - unclassified gene predicted gene, 47756
Tssr4253 14 15130583 to 15130587 4 - TSS region transcription start site region 4253
Tssr124323 14 15148779 to 15148806 27 + TSS region transcription start site region 124323
Gm47758 14 15154891 to 15157213 2322 - lincRNA gene predicted gene, 47758
Gm47759 14 15223952 to 15226166 2214 - pseudogene predicted gene, 47759
D14Sh1 14 15260650 to 15261419 769 DNA segment DNA segment, Chr 14, Steve Hardies 1
Gm47763 14 15298523 to 15298861 338 - pseudogene predicted gene, 47763
Gm31658 14 15307123 to 15332420 25297 + lncRNA gene predicted gene, 31658
Gm31577 14 15310106 to 15321883 11777 - lincRNA gene predicted gene, 31577
Lrrc3b 14 15357515 to 15438987 81472 - protein coding gene leucine rich repeat containing 3B
Tssr124324 14 15358177 to 15358178 1 + TSS region transcription start site region 124324
B230110C06Rik 14 15437579 to 15451925 14346 + lincRNA gene RIKEN cDNA B230110C06 gene
Tssr124325 14 15437581 to 15437592 11 + TSS region transcription start site region 124325
Tssr124326 14 15437647 to 15437677 30 + TSS region transcription start site region 124326
Cpgi6179 14 15438227 to 15439308 1081 CpG island CpG island 6179
Tssr127497 14 15438743 to 15438767 24 - TSS region transcription start site region 127497
Tssr127498 14 15438819 to 15438833 14 - TSS region transcription start site region 127498
Tssr127499 14 15438839 to 15438848 9 - TSS region transcription start site region 127499
Tssr127500 14 15438869 to 15438876 7 - TSS region transcription start site region 127500
Tssr127501 14 15438958 to 15438963 5 - TSS region transcription start site region 127501
Tssr127502 14 15438974 to 15439002 28 - TSS region transcription start site region 127502
Gm10403 14 15456331 to 15458041 1710 + unclassified non-coding RNA gene predicted gene 10403
Gm47779 14 15601874 to 15602023 149 - pseudogene predicted gene, 47779
D14Dcr15 14 15673887 to 15673988 101 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 15
Gm47782 14 15697956 to 15911315 213359 - lincRNA gene predicted gene, 47782
Gm31804 14 15775104 to 15791801 16697 + lincRNA gene predicted gene, 31804
Gm47780 14 15876628 to 15879459 2831 + lincRNA gene predicted gene, 47780
Tssr124327 14 15910429 to 15910433 4 + TSS region transcription start site region 124327
Gm8514 14 15910518 to 15912163 1645 + pseudogene predicted gene 8514
Tssr127503 14 15934899 to 15934909 10 - TSS region transcription start site region 127503
1700062C10Rik 14 16000816 to 16037265 36449 - lincRNA gene RIKEN cDNA 1700062C10 gene
Gm8517 14 16171397 to 16172608 1211 + pseudogene predicted gene 8517
Tssr127504 14 16172446 to 16172465 19 - TSS region transcription start site region 127504
Tssr127505 14 16172466 to 16172488 22 - TSS region transcription start site region 127505
Tssr127506 14 16172492 to 16172509 17 - TSS region transcription start site region 127506
Tssr127507 14 16173320 to 16173321 1 - TSS region transcription start site region 127507
Tssr124328 14 16173680 to 16173696 16 + TSS region transcription start site region 124328
Tssr124329 14 16224993 to 16224998 5 + TSS region transcription start site region 124329
Rpl31-ps3 14 16225023 to 16225370 347 + pseudogene ribosomal protein L31, pseudogene 3
Oxsm 14 16238659 to 16249808 11149 - protein coding gene 3-oxoacyl-ACP synthase, mitochondrial
Cpgi6180 14 16242997 to 16243554 557 CpG island CpG island 6180
Tssr127508 14 16243309 to 16243344 35 - TSS region transcription start site region 127508
Gm47794 14 16243351 to 16245091 1740 + antisense lncRNA gene predicted gene, 47794
Cpgi6181 14 16249106 to 16249859 753 CpG island CpG island 6181
Tssr127509 14 16249154 to 16249182 28 - TSS region transcription start site region 127509
Tssr124330 14 16249259 to 16249366 107 + TSS region transcription start site region 124330
Ngly1 14 16249314 to 16311926 62612 + protein coding gene N-glycanase 1
Tssr127510 14 16249675 to 16249689 14 - TSS region transcription start site region 127510
Tssr124331 14 16253880 to 16253882 2 + TSS region transcription start site region 124331