Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:14115369-15059216

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Psmd6 14 14112185 to 14120904 8719 - protein coding gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
Cpgi6176 14 14120268 to 14121107 839 CpG island CpG island 6176
Tssr127492 14 14120904 to 14120963 59 - TSS region transcription start site region 127492
Gm48797 14 14123570 to 14123975 405 + pseudogene predicted gene, 48797
Olfr720 14 14175130 to 14176080 950 - protein coding gene olfactory receptor 720
Csnk2a1-ps1 14 14197306 to 14198464 1158 + pseudogene casein kinase 2, alpha 1 polypeptide, pseudogene 1
Gm48841 14 14254663 to 14257503 2840 - pseudogene predicted gene, 48841
Gm48852 14 14258286 to 14258568 282 + pseudogene predicted gene, 48852
Gm3895 14 14259338 to 14259638 300 - pseudogene predicted gene 3895
Gm48857 14 14292405 to 14294676 2271 - lincRNA gene predicted gene, 48857
Tssr127493 14 14294654 to 14294689 35 - TSS region transcription start site region 127493
Gm48859 14 14302683 to 14303111 428 - pseudogene predicted gene, 48859
Gm48860 14 14328004 to 14347264 19260 - antisense lncRNA gene predicted gene, 48860
Olfr31 14 14328113 to 14329066 953 + protein coding gene olfactory receptor 31
Cpgi6177 14 14345342 to 14347064 1722 CpG island CpG island 6177
Il3ra 14 14346001 to 14355493 9492 + protein coding gene interleukin 3 receptor, alpha chain
Tssr124306 14 14346400 to 14346477 77 + TSS region transcription start site region 124306
Tssr124307 14 14346581 to 14346615 34 + TSS region transcription start site region 124307
Tssr124308 14 14346618 to 14346627 9 + TSS region transcription start site region 124308
Tssr124309 14 14347105 to 14347128 23 + TSS region transcription start site region 124309
Tssr124310 14 14349961 to 14349975 14 + TSS region transcription start site region 124310
Gm6734 14 14371655 to 14372253 598 + pseudogene predicted gene 6734
Olfr721-ps1 14 14407224 to 14408198 974 + pseudogene olfactory receptor 721, pseudogene 1
Tssr127494 14 14423220 to 14423231 11 - TSS region transcription start site region 127494
Gm47654 14 14429177 to 14430245 1068 + pseudogene predicted gene, 47654
Gm21063 14 14437740 to 14438708 968 + pseudogene predicted gene, 21063
Gm8483 14 14447661 to 14448944 1283 - pseudogene predicted gene 8483
Gm47678 14 14585369 to 14589216 3847 - pseudogene predicted gene, 47678
Gm47685 14 14589946 to 14590314 368 + pseudogene predicted gene, 47685
Gm19018 14 14659108 to 14659879 771 + pseudogene predicted gene, 19018
Tssr124311 14 14686399 to 14686432 33 + TSS region transcription start site region 124311
Tssr124312 14 14686798 to 14686837 39 + TSS region transcription start site region 124312
Cpgi6178 14 14702497 to 14703850 1353 CpG island CpG island 6178
Slc4a7 14 14703011 to 14799944 96933 + protein coding gene solute carrier family 4, sodium bicarbonate cotransporter, member 7
Tssr124313 14 14703042 to 14703073 31 + TSS region transcription start site region 124313
Tssr4251 14 14703089 to 14703092 3 + TSS region transcription start site region 4251
Tssr124314 14 14704057 to 14704061 4 + TSS region transcription start site region 124314
Tssr124315 14 14716976 to 14716980 4 + TSS region transcription start site region 124315
Tssr124316 14 14718775 to 14718789 14 + TSS region transcription start site region 124316
Tssr124317 14 14718826 to 14718829 3 + TSS region transcription start site region 124317
Tssr124318 14 14743444 to 14743506 62 + TSS region transcription start site region 124318
Tssr124319 14 14748312 to 14748318 6 + TSS region transcription start site region 124319
Tssr127495 14 14764554 to 14764563 9 - TSS region transcription start site region 127495
Tssr127496 14 14781325 to 14781351 26 - TSS region transcription start site region 127496
Nek10 14 14803580 to 15012059 208479 + protein coding gene NIMA (never in mitosis gene a)- related kinase 10
Tssr124320 14 14804133 to 14804144 11 + TSS region transcription start site region 124320
Tssr4252 14 14893408 to 14893411 3 + TSS region transcription start site region 4252
Tssr124321 14 14963539 to 14963543 4 + TSS region transcription start site region 124321
Gm46441 14 15011662 to 15027397 15735 - lncRNA gene predicted gene, 46441
Gm18142 14 15040807 to 15042169 1362 - pseudogene predicted gene, 18142
Gm31517 14 15053321 to 15065207 11886 - lincRNA gene predicted gene, 31517