Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:13343143-14393239

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Synpr 14 13284780 to 13615469 330689 + protein coding gene synaptoporin
Gm15913 14 13352878 to 13354080 1202 - pseudogene predicted gene 15913
D14Mit147 14 13452469 to 13452592 123 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 147
D14Mit147.1 14 13452577 to 13452715 138 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 147.1
Tssr124290 14 13453937 to 13453952 15 + TSS region transcription start site region 124290
Tssr124291 14 13453971 to 13454005 34 + TSS region transcription start site region 124291
Tssr124292 14 13454010 to 13454123 113 + TSS region transcription start site region 124292
Tssr124293 14 13454130 to 13454145 15 + TSS region transcription start site region 124293
Tssr124294 14 13454194 to 13454233 39 + TSS region transcription start site region 124294
Tssr124295 14 13588839 to 13588841 2 + TSS region transcription start site region 124295
Tssr127478 14 13597107 to 13597110 3 - TSS region transcription start site region 127478
Tssr124296 14 13670867 to 13670919 52 + TSS region transcription start site region 124296
Sntn 14 13670876 to 13683148 12272 + protein coding gene sentan, cilia apical structure protein
Tssr124297 14 13670931 to 13670940 9 + TSS region transcription start site region 124297
Rpl19-ps4 14 13777817 to 13778441 624 - pseudogene ribosomal protein L19, pseudogene 4
Gm27506 14 13778072 to 13778151 79 - miRNA gene predicted gene, 27506
Tssr127479 14 13778461 to 13778473 12 - TSS region transcription start site region 127479
Gm3637 14 13791029 to 13791823 794 - pseudogene predicted gene 3637
Gm281 14 13828428 to 13914521 86093 - protein coding gene predicted gene 281
Gm25964 14 13868143 to 13868239 96 + snRNA gene predicted gene, 25964
D14Mit49 14 13888172 to 13888421 249 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 49
Cpgi6173 14 13901636 to 13901876 240 CpG island CpG island 6173
Gm18576 14 13901842 to 13902464 622 + pseudogene predicted gene, 18576
Tssr127480 14 13906482 to 13906525 43 - TSS region transcription start site region 127480
Tssr127481 14 13914464 to 13914478 14 - TSS region transcription start site region 127481
Tssr127482 14 13914493 to 13914509 16 - TSS region transcription start site region 127482
Tssr124298 14 13932587 to 13932593 6 + TSS region transcription start site region 124298
Gm11100 14 13935386 to 13948495 13109 + unclassified non-coding RNA gene predicted gene 11100
Thoc7 14 13949012 to 13961847 12835 - protein coding gene THO complex 7
Tssr127483 14 13955026 to 13955029 3 - TSS region transcription start site region 127483
Cpgi6174 14 13960650 to 13961843 1193 CpG island CpG island 6174
Tssr127484 14 13961186 to 13961199 13 - TSS region transcription start site region 127484
Tssr127485 14 13961202 to 13961278 76 - TSS region transcription start site region 127485
Tssr124299 14 13961257 to 13961286 29 + TSS region transcription start site region 124299
Tssr127486 14 13961292 to 13961303 11 - TSS region transcription start site region 127486
Tssr127487 14 13961378 to 13961442 64 - TSS region transcription start site region 127487
Atxn7 14 13961440 to 14107302 145862 + protein coding gene ataxin 7
Tssr127488 14 13961626 to 13961640 14 - TSS region transcription start site region 127488
Tssr127489 14 13961845 to 13961858 13 - TSS region transcription start site region 127489
Tssr127490 14 13961859 to 13961887 28 - TSS region transcription start site region 127490
Tssr124300 14 13976147 to 13976156 9 + TSS region transcription start site region 124300
Tssr124301 14 13999993 to 13999996 3 + TSS region transcription start site region 124301
Cpgi6175 14 14012217 to 14013707 1490 CpG island CpG island 6175
Tssr124302 14 14012627 to 14012693 66 + TSS region transcription start site region 124302
Tssr124303 14 14013125 to 14013195 70 + TSS region transcription start site region 124303
Tssr124304 14 14013529 to 14013574 45 + TSS region transcription start site region 124304
Gm31222 14 14066982 to 14072119 5137 + lncRNA gene predicted gene, 31222
Tssr124305 14 14067870 to 14067885 15 + TSS region transcription start site region 124305
Tssr127491 14 14101440 to 14101459 19 - TSS region transcription start site region 127491
Psmd6 14 14112185 to 14120904 8719 - protein coding gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
Cpgi6176 14 14120268 to 14121107 839 CpG island CpG island 6176
Tssr127492 14 14120904 to 14120963 59 - TSS region transcription start site region 127492
Gm48797 14 14123570 to 14123975 405 + pseudogene predicted gene, 48797
Olfr720 14 14175130 to 14176080 950 - protein coding gene olfactory receptor 720
Csnk2a1-ps1 14 14197306 to 14198464 1158 + pseudogene casein kinase 2, alpha 1 polypeptide, pseudogene 1
Gm48841 14 14254663 to 14257503 2840 - pseudogene predicted gene, 48841
Gm48852 14 14258286 to 14258568 282 + pseudogene predicted gene, 48852
Gm3895 14 14259338 to 14259638 300 - pseudogene predicted gene 3895
Gm48857 14 14292405 to 14294676 2271 - lincRNA gene predicted gene, 48857
Tssr127493 14 14294654 to 14294689 35 - TSS region transcription start site region 127493
Gm48859 14 14302683 to 14303111 428 - pseudogene predicted gene, 48859
Gm48860 14 14328004 to 14347264 19260 - antisense lncRNA gene predicted gene, 48860
Olfr31 14 14328113 to 14329066 953 + protein coding gene olfactory receptor 31
Cpgi6177 14 14345342 to 14347064 1722 CpG island CpG island 6177
Il3ra 14 14346001 to 14355493 9492 + protein coding gene interleukin 3 receptor, alpha chain
Tssr124306 14 14346400 to 14346477 77 + TSS region transcription start site region 124306
Tssr124307 14 14346581 to 14346615 34 + TSS region transcription start site region 124307
Tssr124308 14 14346618 to 14346627 9 + TSS region transcription start site region 124308
Tssr124309 14 14347105 to 14347128 23 + TSS region transcription start site region 124309
Tssr124310 14 14349961 to 14349975 14 + TSS region transcription start site region 124310
Gm6734 14 14371655 to 14372253 598 + pseudogene predicted gene 6734