Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:122936634-123967144

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930594M22Rik 14 122913205 to 122956357 43152 + antisense lncRNA gene RIKEN cDNA 4930594M22 gene
Tmtc4 14 122918971 to 122983282 64311 - protein coding gene transmembrane and tetratricopeptide repeat containing 4
Cpgi6903 14 122982398 to 122983826 1428 CpG island CpG island 6903
Tssr130352 14 122983185 to 122983209 24 - TSS region transcription start site region 130352
Tssr130353 14 122983211 to 122983277 66 - TSS region transcription start site region 130353
Gm33906 14 123043282 to 123265002 221720 + lncRNA gene predicted gene, 33906
Gm49294 14 123165302 to 123165485 183 - pseudogene predicted gene, 49294
AA536875 14 123168503 to 123176176 7673 + lncRNA gene expressed sequence AA536875
Nalcn 14 123276634 to 123627144 350510 - protein coding gene sodium leak channel, non-selective
Tssr130354 14 123283956 to 123283966 10 - TSS region transcription start site region 130354
Gm49297 14 123386566 to 123389370 2804 - unclassified gene predicted gene, 49297
Gm18370 14 123443951 to 123444459 508 + pseudogene predicted gene, 18370
D14Mit248 14 123450189 to 123450377 188 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-248
D14Mit107 14 123595892 to 123596041 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 107
D14Mit107.1 14 123596070 to 123596201 131 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 107.1
Cpgi6904 14 123626405 to 123627249 844 CpG island CpG island 6904
Tssr130355 14 123626841 to 123626888 47 - TSS region transcription start site region 130355
Tssr130356 14 123626945 to 123626988 43 - TSS region transcription start site region 130356
Tssr130357 14 123627031 to 123627057 26 - TSS region transcription start site region 130357
Tssr130358 14 123627059 to 123627154 95 - TSS region transcription start site region 130358
Tssr130359 14 123627155 to 123627175 20 - TSS region transcription start site region 130359
Gm46490 14 123628713 to 123631890 3177 - lncRNA gene predicted gene, 46490
Itgbl1 14 123659936 to 123974080 314144 + protein coding gene integrin, beta-like 1
Tssr127373 14 123660115 to 123660209 94 + TSS region transcription start site region 127373
Tssr127374 14 123660221 to 123660233 12 + TSS region transcription start site region 127374
Tssr127375 14 123660265 to 123660284 19 + TSS region transcription start site region 127375
Tssr127376 14 123660291 to 123660311 20 + TSS region transcription start site region 127376
Cpgi6905 14 123661328 to 123661527 199 CpG island CpG island 6905
Gm9308 14 123698141 to 123698588 447 - pseudogene predicted gene 9308
Gm25272 14 123933718 to 123933845 127 + snoRNA gene predicted gene, 25272