Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:12292994-13353012

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49355 14 12283976 to 12324454 40478 + protein coding gene predicted gene, 49355
3830406C13Rik 14 12284173 to 12303231 19058 + protein coding gene RIKEN cDNA 3830406C13 gene
Tssr124284 14 12301312 to 12301319 7 + TSS region transcription start site region 124284
D030051J21Rik 14 12321379 to 12324473 3094 + lincRNA gene RIKEN cDNA D030051J21 gene
Gm24578 14 12333776 to 12333904 128 - snoRNA gene predicted gene, 24578
Cpgi6167 14 12341071 to 12341776 705 CpG island CpG island 6167
Fezf2 14 12341892 to 12345865 3973 - protein coding gene Fez family zinc finger 2
Tssr127452 14 12343313 to 12343318 5 - TSS region transcription start site region 127452
Cpgi6168 14 12343607 to 12343914 307 CpG island CpG island 6168
Tssr127453 14 12343730 to 12343749 19 - TSS region transcription start site region 127453
Cpgi6169 14 12344403 to 12346584 2181 CpG island CpG island 6169
Tssr127454 14 12344838 to 12344846 8 - TSS region transcription start site region 127454
Tssr127455 14 12345245 to 12345255 10 - TSS region transcription start site region 127455
Tssr127456 14 12345633 to 12345671 38 - TSS region transcription start site region 127456
Tssr127457 14 12345727 to 12345740 13 - TSS region transcription start site region 127457
Tssr127458 14 12345780 to 12345789 9 - TSS region transcription start site region 127458
Tssr127459 14 12345809 to 12345833 24 - TSS region transcription start site region 127459
Tssr127460 14 12345847 to 12345872 25 - TSS region transcription start site region 127460
Tssr127461 14 12346094 to 12346116 22 - TSS region transcription start site region 127461
Tssr127462 14 12346645 to 12346651 6 - TSS region transcription start site region 127462
Cpgi6170 14 12347369 to 12347562 193 CpG island CpG island 6170
Cadps 14 12372563 to 12823079 450516 - protein coding gene Ca2+-dependent secretion activator
Gm48239 14 12374585 to 12384729 10144 + antisense lncRNA gene predicted gene, 48239
Gm48267 14 12400698 to 12402230 1532 - unclassified gene predicted gene, 48267
n-R5s45 14 12427532 to 12427641 109 - rRNA gene nuclear encoded rRNA 5S 45
Tssr127463 14 12437534 to 12437555 21 - TSS region transcription start site region 127463
Tssr127464 14 12466923 to 12466939 16 - TSS region transcription start site region 127464
Tssr127465 14 12466991 to 12467010 19 - TSS region transcription start site region 127465
Tssr127466 14 12467059 to 12467081 22 - TSS region transcription start site region 127466
Tssr127467 14 12467083 to 12467100 17 - TSS region transcription start site region 127467
Ssen3 14 12481829 to 12481959 130 QTL suseptibility to Sendai virus 3
D14Mit10 14 12481829 to 12481959 130 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 10
sky 14 12481829 to 21012571 8530742 heritable phenotypic marker severe kyphosis
Mrdq4 14 12546018 to 48527625 35981607 QTL modifier of retinal degeneration QTL 4
D14Mit109 14 12570533 to 12570648 115 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 109
Gm46493 14 12578501 to 12597363 18862 - lncRNA gene predicted gene, 46493
Tssr127468 14 12616127 to 12616146 19 - TSS region transcription start site region 127468
Gm17805 14 12618668 to 12619241 573 + pseudogene predicted gene, 17805
Gm18077 14 12653337 to 12653825 488 + pseudogene predicted gene, 18077
Gm48266 14 12769408 to 12770550 1142 - unclassified gene predicted gene, 48266
Cpgi6171 14 12821515 to 12823313 1798 CpG island CpG island 6171
Tssr127469 14 12822637 to 12822649 12 - TSS region transcription start site region 127469
Tssr124285 14 12822864 to 12822872 8 + TSS region transcription start site region 124285
Tssr127470 14 12822864 to 12822875 11 - TSS region transcription start site region 127470
Tssr127471 14 12822887 to 12822907 20 - TSS region transcription start site region 127471
Tssr127472 14 12822912 to 12822926 14 - TSS region transcription start site region 127472
Tssr127473 14 12822994 to 12823012 18 - TSS region transcription start site region 127473
Tssr127474 14 12823031 to 12823133 102 - TSS region transcription start site region 127474
Tssr127475 14 12823138 to 12823151 13 - TSS region transcription start site region 127475
Tssr124286 14 12867518 to 12867540 22 + TSS region transcription start site region 124286
Gm5457 14 12867553 to 12867885 332 + pseudogene predicted pseudogene 5457
Gm48515 14 12992695 to 12995179 2484 + pseudogene predicted gene, 48515
Gm48526 14 13030370 to 13035765 5395 + lincRNA gene predicted gene, 48526
Gm5087 14 13157388 to 13284638 127250 - lncRNA gene predicted gene 5087
Tssr127476 14 13170718 to 13170722 4 - TSS region transcription start site region 127476
Tssr127477 14 13232897 to 13232903 6 - TSS region transcription start site region 127477
Cpgi6172 14 13284470 to 13284903 433 CpG island CpG island 6172
Tssr4250 14 13284624 to 13284643 19 - TSS region transcription start site region 4250
Tssr124287 14 13284753 to 13284764 11 + TSS region transcription start site region 124287
Tssr124288 14 13284774 to 13284793 19 + TSS region transcription start site region 124288
Synpr 14 13284780 to 13615469 330689 + protein coding gene synaptoporin
Tssr124289 14 13284801 to 13284827 26 + TSS region transcription start site region 124289
Gm15913 14 13352878 to 13354080 1202 - pseudogene predicted gene 15913