Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:122478040-123348058

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zic2 14 122475435 to 122479852 4417 + protein coding gene zinc finger protein of the cerebellum 2
Cpgi6898 14 122478544 to 122479330 786 CpG island CpG island 6898
Tssr127348 14 122479415 to 122479420 5 + TSS region transcription start site region 127348
Tssr127349 14 122479720 to 122479731 11 + TSS region transcription start site region 127349
Tssr127350 14 122480057 to 122480063 6 + TSS region transcription start site region 127350
Gm33769 14 122480933 to 122484211 3278 - lncRNA gene predicted gene, 33769
Cpgi6899 14 122482296 to 122483020 724 CpG island CpG island 6899
Tssr127351 14 122484270 to 122484277 7 + TSS region transcription start site region 127351
Tssr127352 14 122484293 to 122484301 8 + TSS region transcription start site region 127352
Tssr127353 14 122484378 to 122484387 9 + TSS region transcription start site region 127353
Tssr127354 14 122484392 to 122484402 10 + TSS region transcription start site region 127354
Tssr127355 14 122484405 to 122484417 12 + TSS region transcription start site region 127355
Tssr127356 14 122484434 to 122484443 9 + TSS region transcription start site region 127356
Tssr127357 14 122484450 to 122484457 7 + TSS region transcription start site region 127357
Cpgi6900 14 122490436 to 122491128 692 CpG island CpG island 6900
Gm10837 14 122490586 to 122492121 1535 + protein coding gene predicted gene 10837
Gm9399 14 122494612 to 122495250 638 - pseudogene predicted gene 9399
Gm18143 14 122513439 to 122513829 390 - pseudogene predicted gene, 18143
Cpgi6901 14 122534047 to 122534692 645 CpG island CpG island 6901
Tssr127358 14 122534305 to 122534367 62 + TSS region transcription start site region 127358
Pcca 14 122534324 to 122891100 356776 + protein coding gene propionyl-Coenzyme A carboxylase, alpha polypeptide
Tssr127359 14 122534371 to 122534382 11 + TSS region transcription start site region 127359
Tssr127360 14 122557717 to 122557740 23 + TSS region transcription start site region 127360
Gm49259 14 122609119 to 122610113 994 - pseudogene predicted gene, 49259
Gm46487 14 122630485 to 122634038 3553 + protein coding gene predicted gene, 46487
Tssr127361 14 122638350 to 122638390 40 + TSS region transcription start site region 127361
Hgb2 14 122647242 to 122647242 0 QTL hemoglobin 2
Gm49260 14 122686316 to 122688378 2062 + unclassified gene predicted gene, 49260
Tssr4537 14 122712187 to 122712190 3 + TSS region transcription start site region 4537
Gm46489 14 122749014 to 122753081 4067 + lncRNA gene predicted gene, 46489
Tssr127362 14 122749361 to 122749374 13 + TSS region transcription start site region 127362
Tssr127363 14 122867844 to 122867848 4 + TSS region transcription start site region 127363
Tssr127364 14 122876436 to 122876465 29 + TSS region transcription start site region 127364
Tssr127365 14 122876466 to 122876480 14 + TSS region transcription start site region 127365
Tssr127366 14 122876806 to 122876817 11 + TSS region transcription start site region 127366
Tssr127367 14 122876835 to 122876853 18 + TSS region transcription start site region 127367
Ggact 14 122890860 to 122913455 22595 - protein coding gene gamma-glutamylamine cyclotransferase
Tssr130343 14 122891103 to 122891107 4 - TSS region transcription start site region 130343
Tssr127368 14 122891879 to 122891880 1 + TSS region transcription start site region 127368
Tssr130344 14 122905108 to 122905120 12 - TSS region transcription start site region 130344
Gm46488 14 122909786 to 122912857 3071 - lncRNA gene predicted gene, 46488
Cpgi6902 14 122912854 to 122913505 651 CpG island CpG island 6902
Tssr130345 14 122912915 to 122912960 45 - TSS region transcription start site region 130345
Tssr127369 14 122912985 to 122913014 29 + TSS region transcription start site region 127369
Tssr130346 14 122913017 to 122913026 9 - TSS region transcription start site region 130346
Tssr127370 14 122913018 to 122913051 33 + TSS region transcription start site region 127370
Tssr130347 14 122913040 to 122913058 18 - TSS region transcription start site region 130347
Tssr127371 14 122913069 to 122913082 13 + TSS region transcription start site region 127371
Tssr130348 14 122913108 to 122913190 82 - TSS region transcription start site region 130348
Tssr127372 14 122913192 to 122913218 26 + TSS region transcription start site region 127372
Tssr130349 14 122913204 to 122913213 9 - TSS region transcription start site region 130349
4930594M22Rik 14 122913205 to 122956357 43152 + antisense lncRNA gene RIKEN cDNA 4930594M22 gene
Tssr130350 14 122913751 to 122913764 13 - TSS region transcription start site region 130350
Tssr130351 14 122917588 to 122917598 10 - TSS region transcription start site region 130351
Tmtc4 14 122918971 to 122983282 64311 - protein coding gene transmembrane and tetratricopeptide repeat containing 4
Cpgi6903 14 122982398 to 122983826 1428 CpG island CpG island 6903
Tssr130352 14 122983185 to 122983209 24 - TSS region transcription start site region 130352
Tssr130353 14 122983211 to 122983277 66 - TSS region transcription start site region 130353
Gm33906 14 123043282 to 123265002 221720 + lncRNA gene predicted gene, 33906
Gm49294 14 123165302 to 123165485 183 - pseudogene predicted gene, 49294
AA536875 14 123168503 to 123176176 7673 + lncRNA gene expressed sequence AA536875
Nalcn 14 123276634 to 123627144 350510 - protein coding gene sodium leak channel, non-selective
Tssr130354 14 123283956 to 123283966 10 - TSS region transcription start site region 130354