Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:122475860-123328413

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi6896 14 122473895 to 122477026 3131 CpG island CpG island 6896
Zic2 14 122475435 to 122479852 4417 + protein coding gene zinc finger protein of the cerebellum 2
Tssr127346 14 122475958 to 122475980 22 + TSS region transcription start site region 127346
Tssr127347 14 122477222 to 122477227 5 + TSS region transcription start site region 127347
Cpgi6897 14 122477415 to 122477624 209 CpG island CpG island 6897
Cpgi6898 14 122478544 to 122479330 786 CpG island CpG island 6898
Tssr127348 14 122479415 to 122479420 5 + TSS region transcription start site region 127348
Tssr127349 14 122479720 to 122479731 11 + TSS region transcription start site region 127349
Tssr127350 14 122480057 to 122480063 6 + TSS region transcription start site region 127350
Gm33769 14 122480933 to 122484211 3278 - lncRNA gene predicted gene, 33769
Cpgi6899 14 122482296 to 122483020 724 CpG island CpG island 6899
Tssr127351 14 122484270 to 122484277 7 + TSS region transcription start site region 127351
Tssr127352 14 122484293 to 122484301 8 + TSS region transcription start site region 127352
Tssr127353 14 122484378 to 122484387 9 + TSS region transcription start site region 127353
Tssr127354 14 122484392 to 122484402 10 + TSS region transcription start site region 127354
Tssr127355 14 122484405 to 122484417 12 + TSS region transcription start site region 127355
Tssr127356 14 122484434 to 122484443 9 + TSS region transcription start site region 127356
Tssr127357 14 122484450 to 122484457 7 + TSS region transcription start site region 127357
Cpgi6900 14 122490436 to 122491128 692 CpG island CpG island 6900
Gm10837 14 122490586 to 122492121 1535 + protein coding gene predicted gene 10837
Gm9399 14 122494612 to 122495250 638 - pseudogene predicted gene 9399
Gm18143 14 122513439 to 122513829 390 - pseudogene predicted gene, 18143
Cpgi6901 14 122534047 to 122534692 645 CpG island CpG island 6901
Tssr127358 14 122534305 to 122534367 62 + TSS region transcription start site region 127358
Pcca 14 122534324 to 122891100 356776 + protein coding gene propionyl-Coenzyme A carboxylase, alpha polypeptide
Tssr127359 14 122534371 to 122534382 11 + TSS region transcription start site region 127359
Tssr127360 14 122557717 to 122557740 23 + TSS region transcription start site region 127360
Gm49259 14 122609119 to 122610113 994 - pseudogene predicted gene, 49259
Gm46487 14 122630485 to 122634038 3553 + protein coding gene predicted gene, 46487
Tssr127361 14 122638350 to 122638390 40 + TSS region transcription start site region 127361
Hgb2 14 122647242 to 122647242 0 QTL hemoglobin 2
Gm49260 14 122686316 to 122688378 2062 + unclassified gene predicted gene, 49260
Tssr4537 14 122712187 to 122712190 3 + TSS region transcription start site region 4537
Gm46489 14 122749014 to 122753081 4067 + lncRNA gene predicted gene, 46489
Tssr127362 14 122749361 to 122749374 13 + TSS region transcription start site region 127362
Tssr127363 14 122867844 to 122867848 4 + TSS region transcription start site region 127363
Tssr127364 14 122876436 to 122876465 29 + TSS region transcription start site region 127364
Tssr127365 14 122876466 to 122876480 14 + TSS region transcription start site region 127365
Tssr127366 14 122876806 to 122876817 11 + TSS region transcription start site region 127366
Tssr127367 14 122876835 to 122876853 18 + TSS region transcription start site region 127367
Ggact 14 122890860 to 122913455 22595 - protein coding gene gamma-glutamylamine cyclotransferase
Tssr130343 14 122891103 to 122891107 4 - TSS region transcription start site region 130343
Tssr127368 14 122891879 to 122891880 1 + TSS region transcription start site region 127368
Tssr130344 14 122905108 to 122905120 12 - TSS region transcription start site region 130344
Gm46488 14 122909786 to 122912857 3071 - lncRNA gene predicted gene, 46488
Cpgi6902 14 122912854 to 122913505 651 CpG island CpG island 6902
Tssr130345 14 122912915 to 122912960 45 - TSS region transcription start site region 130345
Tssr127369 14 122912985 to 122913014 29 + TSS region transcription start site region 127369
Tssr130346 14 122913017 to 122913026 9 - TSS region transcription start site region 130346
Tssr127370 14 122913018 to 122913051 33 + TSS region transcription start site region 127370
Tssr130347 14 122913040 to 122913058 18 - TSS region transcription start site region 130347
Tssr127371 14 122913069 to 122913082 13 + TSS region transcription start site region 127371
Tssr130348 14 122913108 to 122913190 82 - TSS region transcription start site region 130348
Tssr127372 14 122913192 to 122913218 26 + TSS region transcription start site region 127372
Tssr130349 14 122913204 to 122913213 9 - TSS region transcription start site region 130349
4930594M22Rik 14 122913205 to 122956357 43152 + antisense lncRNA gene RIKEN cDNA 4930594M22 gene
Tssr130350 14 122913751 to 122913764 13 - TSS region transcription start site region 130350
Tssr130351 14 122917588 to 122917598 10 - TSS region transcription start site region 130351
Tmtc4 14 122918971 to 122983282 64311 - protein coding gene transmembrane and tetratricopeptide repeat containing 4
Cpgi6903 14 122982398 to 122983826 1428 CpG island CpG island 6903
Tssr130352 14 122983185 to 122983209 24 - TSS region transcription start site region 130352
Tssr130353 14 122983211 to 122983277 66 - TSS region transcription start site region 130353
Gm33906 14 123043282 to 123265002 221720 + lncRNA gene predicted gene, 33906
Gm49294 14 123165302 to 123165485 183 - pseudogene predicted gene, 49294
AA536875 14 123168503 to 123176176 7673 + lncRNA gene expressed sequence AA536875
Nalcn 14 123276634 to 123627144 350510 - protein coding gene sodium leak channel, non-selective
Tssr130354 14 123283956 to 123283966 10 - TSS region transcription start site region 130354