Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:122003599-122463613

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ubac2 14 121878620 to 122021034 142414 + protein coding gene ubiquitin associated domain containing 2
Gm33473 14 121994480 to 122004649 10169 + lncRNA gene predicted gene, 33473
Tssr127308 14 122009814 to 122009828 14 + TSS region transcription start site region 127308
Tssr127309 14 122012007 to 122012018 11 + TSS region transcription start site region 127309
Tssr130314 14 122024088 to 122024094 6 - TSS region transcription start site region 130314
Tssr127310 14 122030557 to 122030573 16 + TSS region transcription start site region 127310
Tssr127311 14 122034660 to 122034677 17 + TSS region transcription start site region 127311
Timm8a2 14 122034674 to 122038420 3746 + protein coding gene translocase of inner mitochondrial membrane 8A2
Tssr130315 14 122058062 to 122058083 21 - TSS region transcription start site region 130315
Tssr127312 14 122058338 to 122058366 28 + TSS region transcription start site region 127312
Gm49236 14 122064351 to 122091226 26875 - lincRNA gene predicted gene, 49236
A330035P11Rik 14 122103430 to 122106974 3544 - lincRNA gene RIKEN cDNA A330035P11 gene
Cpgi6887 14 122104903 to 122105500 597 CpG island CpG island 6887
Tssr127313 14 122105001 to 122105030 29 + TSS region transcription start site region 127313
Tssr127314 14 122105123 to 122105143 20 + TSS region transcription start site region 127314
Tssr130316 14 122105834 to 122105841 7 - TSS region transcription start site region 130316
Cpgi6888 14 122106746 to 122107846 1100 CpG island CpG island 6888
Tssr130317 14 122106916 to 122106927 11 - TSS region transcription start site region 130317
Tssr130318 14 122106940 to 122106989 49 - TSS region transcription start site region 130318
Tssr127315 14 122107029 to 122107044 15 + TSS region transcription start site region 127315
Tssr127316 14 122107065 to 122107070 5 + TSS region transcription start site region 127316
Tssr127317 14 122107076 to 122107116 40 + TSS region transcription start site region 127317
Tm9sf2 14 122107082 to 122159603 52521 + protein coding gene transmembrane 9 superfamily member 2
Tssr127318 14 122107119 to 122107172 53 + TSS region transcription start site region 127318
Gm6254 14 122117938 to 122119009 1071 + pseudogene predicted gene 6254
Gm17082 14 122121553 to 122122643 1090 + pseudogene predicted gene 17082
Tssr127319 14 122150825 to 122150857 32 + TSS region transcription start site region 127319
Tssr127320 14 122155337 to 122155356 19 + TSS region transcription start site region 127320
Tssr127321 14 122171264 to 122171307 43 + TSS region transcription start site region 127321
Cpgi6889 14 122181446 to 122182074 628 CpG island CpG island 6889
Clybl 14 122181704 to 122402234 220530 + protein coding gene citrate lyase beta like
Tssr127322 14 122181705 to 122181725 20 + TSS region transcription start site region 127322
Tssr127323 14 122228348 to 122228368 20 + TSS region transcription start site region 127323
Tssr130319 14 122229204 to 122229212 8 - TSS region transcription start site region 130319
1700108J01Rik 14 122229905 to 122233638 3733 - antisense lncRNA gene RIKEN cDNA 1700108J01 gene
Tssr130320 14 122233551 to 122233556 5 - TSS region transcription start site region 130320
Tssr130321 14 122233572 to 122233581 9 - TSS region transcription start site region 130321
Tssr130322 14 122233599 to 122233613 14 - TSS region transcription start site region 130322
Tssr130323 14 122233622 to 122233640 18 - TSS region transcription start site region 130323
Tssr127324 14 122280015 to 122280025 10 + TSS region transcription start site region 127324
Tssr127325 14 122280677 to 122280699 22 + TSS region transcription start site region 127325
Tssr127326 14 122280718 to 122280732 14 + TSS region transcription start site region 127326
Tssr127327 14 122280768 to 122280779 11 + TSS region transcription start site region 127327
Gm5089 14 122365679 to 122451146 85467 - unclassified gene predicted gene 5089
Cpgi6890 14 122367292 to 122367462 170 CpG island CpG island 6890
Tssr130324 14 122372648 to 122372654 6 - TSS region transcription start site region 130324
Tssr127328 14 122375210 to 122375232 22 + TSS region transcription start site region 127328
Tssr127329 14 122375233 to 122375251 18 + TSS region transcription start site region 127329
Tssr4535 14 122375408 to 122375419 11 + TSS region transcription start site region 4535
Tssr127330 14 122375490 to 122375506 16 + TSS region transcription start site region 127330
Tssr127331 14 122375795 to 122375815 20 + TSS region transcription start site region 127331
2810433H14Rik 14 122377997 to 122378195 198 unclassified gene RIKEN cDNA 2810433H14 gene
Tssr127332 14 122384069 to 122384074 5 + TSS region transcription start site region 127332
Gm25464 14 122388054 to 122388160 106 - snRNA gene predicted gene, 25464
Cpgi6891 14 122406315 to 122407179 864 CpG island CpG island 6891
Tssr130325 14 122439247 to 122439252 5 - TSS region transcription start site region 130325
Cpgi6892 14 122450042 to 122451371 1329 CpG island CpG island 6892
Tssr130326 14 122451080 to 122451093 13 - TSS region transcription start site region 130326
Tssr130327 14 122451096 to 122451107 11 - TSS region transcription start site region 130327
Tssr130328 14 122451109 to 122451121 12 - TSS region transcription start site region 130328
Tssr130329 14 122451130 to 122451150 20 - TSS region transcription start site region 130329
Tssr130330 14 122451156 to 122451186 30 - TSS region transcription start site region 130330
Tssr4536 14 122451193 to 122451200 7 - TSS region transcription start site region 4536
Tssr130331 14 122451263 to 122451270 7 - TSS region transcription start site region 130331
Cpgi6893 14 122453628 to 122453937 309 CpG island CpG island 6893
Zic5 14 122459160 to 122465658 6498 - protein coding gene zinc finger protein of the cerebellum 5
Tssr130332 14 122461612 to 122461622 10 - TSS region transcription start site region 130332
Cpgi6894 14 122462785 to 122465831 3046 CpG island CpG island 6894