Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:12117059-12817081

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bomd2 14 11553553 to 12242040 688487 QTL bone mineral density 2
Ptprg 14 11553553 to 12242040 688487 + protein coding gene protein tyrosine phosphatase, receptor type, G
Gm48603 14 12151447 to 12152584 1137 - unclassified gene predicted gene, 48603
Tssr124277 14 12189948 to 12189953 5 + TSS region transcription start site region 124277
Tssr124278 14 12189969 to 12190001 32 + TSS region transcription start site region 124278
Tssr124279 14 12190003 to 12190025 22 + TSS region transcription start site region 124279
Tssr124280 14 12190042 to 12190047 5 + TSS region transcription start site region 124280
D14Mit108 14 12242322 to 12242454 132 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 108
Gm49355 14 12283976 to 12324454 40478 + protein coding gene predicted gene, 49355
Cpgi6166 14 12284042 to 12284783 741 CpG island CpG island 6166
3830406C13Rik 14 12284173 to 12303231 19058 + protein coding gene RIKEN cDNA 3830406C13 gene
Tssr124281 14 12284177 to 12284194 17 + TSS region transcription start site region 124281
Tssr124282 14 12284198 to 12284239 41 + TSS region transcription start site region 124282
Tssr124283 14 12284242 to 12284271 29 + TSS region transcription start site region 124283
Tssr124284 14 12301312 to 12301319 7 + TSS region transcription start site region 124284
D030051J21Rik 14 12321379 to 12324473 3094 + lincRNA gene RIKEN cDNA D030051J21 gene
Gm24578 14 12333776 to 12333904 128 - snoRNA gene predicted gene, 24578
Cpgi6167 14 12341071 to 12341776 705 CpG island CpG island 6167
Fezf2 14 12341892 to 12345865 3973 - protein coding gene Fez family zinc finger 2
Tssr127452 14 12343313 to 12343318 5 - TSS region transcription start site region 127452
Cpgi6168 14 12343607 to 12343914 307 CpG island CpG island 6168
Tssr127453 14 12343730 to 12343749 19 - TSS region transcription start site region 127453
Cpgi6169 14 12344403 to 12346584 2181 CpG island CpG island 6169
Tssr127454 14 12344838 to 12344846 8 - TSS region transcription start site region 127454
Tssr127455 14 12345245 to 12345255 10 - TSS region transcription start site region 127455
Tssr127456 14 12345633 to 12345671 38 - TSS region transcription start site region 127456
Tssr127457 14 12345727 to 12345740 13 - TSS region transcription start site region 127457
Tssr127458 14 12345780 to 12345789 9 - TSS region transcription start site region 127458
Tssr127459 14 12345809 to 12345833 24 - TSS region transcription start site region 127459
Tssr127460 14 12345847 to 12345872 25 - TSS region transcription start site region 127460
Tssr127461 14 12346094 to 12346116 22 - TSS region transcription start site region 127461
Tssr127462 14 12346645 to 12346651 6 - TSS region transcription start site region 127462
Cpgi6170 14 12347369 to 12347562 193 CpG island CpG island 6170
Cadps 14 12372563 to 12823079 450516 - protein coding gene Ca2+-dependent secretion activator
Gm48239 14 12374585 to 12384729 10144 + antisense lncRNA gene predicted gene, 48239
Gm48267 14 12400698 to 12402230 1532 - unclassified gene predicted gene, 48267
n-R5s45 14 12427532 to 12427641 109 - rRNA gene nuclear encoded rRNA 5S 45
Tssr127463 14 12437534 to 12437555 21 - TSS region transcription start site region 127463
Tssr127464 14 12466923 to 12466939 16 - TSS region transcription start site region 127464
Tssr127465 14 12466991 to 12467010 19 - TSS region transcription start site region 127465
Tssr127466 14 12467059 to 12467081 22 - TSS region transcription start site region 127466
Tssr127467 14 12467083 to 12467100 17 - TSS region transcription start site region 127467
sky 14 12481829 to 21012571 8530742 heritable phenotypic marker severe kyphosis
Ssen3 14 12481829 to 12481959 130 QTL suseptibility to Sendai virus 3
D14Mit10 14 12481829 to 12481959 130 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 10
Mrdq4 14 12546018 to 48527625 35981607 QTL modifier of retinal degeneration QTL 4
D14Mit109 14 12570533 to 12570648 115 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 109
Gm46493 14 12578501 to 12597363 18862 - lncRNA gene predicted gene, 46493
Tssr127468 14 12616127 to 12616146 19 - TSS region transcription start site region 127468
Gm17805 14 12618668 to 12619241 573 + pseudogene predicted gene, 17805
Gm18077 14 12653337 to 12653825 488 + pseudogene predicted gene, 18077
Gm48266 14 12769408 to 12770550 1142 - unclassified gene predicted gene, 48266