Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:120492245-121572392

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rap2a 14 120478461 to 120507194 28733 + protein coding gene RAS related protein 2a
Tssr127253 14 120494602 to 120494603 1 + TSS region transcription start site region 127253
Tssr127254 14 120506194 to 120506203 9 + TSS region transcription start site region 127254
Tssr127255 14 120506245 to 120506258 13 + TSS region transcription start site region 127255
Gm41251 14 120532514 to 120559629 27115 + lncRNA gene predicted gene, 41251
D14Mit77 14 120563853 to 120564037 184 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 77
Gm41252 14 120572434 to 120582427 9993 + lncRNA gene predicted gene, 41252
Gm33077 14 120610720 to 120613544 2824 + lncRNA gene predicted gene, 33077
Gm49008 14 120632962 to 120660850 27888 + lincRNA gene predicted gene, 49008
Tssr4532 14 120637002 to 120637045 43 + TSS region transcription start site region 4532
4930424E08Rik 14 120637022 to 120638218 1196 + lncRNA gene RIKEN cDNA 4930424E08 gene
Rpl19-ps5 14 120713078 to 120713666 588 + pseudogene ribosomal protein L19, pseudogene 5
Cpgi6878 14 120721239 to 120721417 178 CpG island CpG island 6878
Gm17613 14 120749185 to 120750062 877 + lincRNA gene predicted gene, 17613
Tssr130254 14 120774606 to 120774609 3 - TSS region transcription start site region 130254
Tssr127256 14 120798710 to 120798720 10 + TSS region transcription start site region 127256
Gm25781 14 120798853 to 120798936 83 + snRNA gene predicted gene, 25781
Gm41253 14 120805143 to 120806284 1141 - lincRNA gene predicted gene, 41253
Tssr130255 14 120806305 to 120806312 7 - TSS region transcription start site region 130255
D14Mit135 14 120813618 to 120813789 171 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 135
Gm18076 14 120815127 to 120815740 613 - pseudogene predicted gene, 18076
Gm9391 14 120827158 to 120827546 388 + pseudogene predicted gene 9391
Cpgi6879 14 120831922 to 120832151 229 CpG island CpG island 6879
Gm33173 14 120839732 to 120848610 8878 - lncRNA gene predicted gene, 33173
Tssr127257 14 120896839 to 120896851 12 + TSS region transcription start site region 127257
Tssr127258 14 120896853 to 120896877 24 + TSS region transcription start site region 127258
Tssr127259 14 120896879 to 120896897 18 + TSS region transcription start site region 127259
Tssr127260 14 120897243 to 120897263 20 + TSS region transcription start site region 127260
Cpgi6880 14 120910299 to 120911929 1630 CpG island CpG island 6880
Tssr127261 14 120910607 to 120910620 13 + TSS region transcription start site region 127261
Tssr127262 14 120911115 to 120911147 32 + TSS region transcription start site region 127262
Tssr127263 14 120911164 to 120911173 9 + TSS region transcription start site region 127263
Tssr127264 14 120911177 to 120911198 21 + TSS region transcription start site region 127264
Tssr127265 14 120911213 to 120911253 40 + TSS region transcription start site region 127265
Ipo5 14 120911224 to 120947999 36775 + protein coding gene importin 5
Tssr127266 14 120946804 to 120946834 30 + TSS region transcription start site region 127266
D14Mit266 14 121032245 to 121032392 147 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 266
Kdnw2 14 121032392 to 20837405 -100194987 QTL kidney weight 2
Cpgi6881 14 121034776 to 121036444 1668 CpG island CpG island 6881
Tssr127267 14 121035156 to 121035186 30 + TSS region transcription start site region 127267
Tssr127268 14 121035194 to 121035208 14 + TSS region transcription start site region 127268
Farp1 14 121035200 to 121283744 248544 + protein coding gene FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
Tssr127269 14 121035436 to 121035447 11 + TSS region transcription start site region 127269
Tssr127270 14 121035463 to 121035479 16 + TSS region transcription start site region 127270
Tssr127271 14 121035484 to 121035500 16 + TSS region transcription start site region 127271
Tssr127272 14 121035509 to 121035520 11 + TSS region transcription start site region 127272
Tssr127273 14 121035538 to 121035575 37 + TSS region transcription start site region 127273
Tssr127274 14 121035682 to 121035693 11 + TSS region transcription start site region 127274
Tssr127275 14 121035759 to 121035802 43 + TSS region transcription start site region 127275
Tssr127276 14 121035805 to 121035826 21 + TSS region transcription start site region 127276
D14Mit136 14 121054742 to 121054877 135 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 136
Tssr127277 14 121057633 to 121057637 4 + TSS region transcription start site region 127277
Tssr4533 14 121063206 to 121063213 7 + TSS region transcription start site region 4533
Tssr127278 14 121107471 to 121107472 1 + TSS region transcription start site region 127278
Tssr130256 14 121145892 to 121145904 12 - TSS region transcription start site region 130256
Tssr127279 14 121146802 to 121146807 5 + TSS region transcription start site region 127279
Tssr130257 14 121159653 to 121159684 31 - TSS region transcription start site region 130257
Tssr127280 14 121230935 to 121230939 4 + TSS region transcription start site region 127280
Tssr127281 14 121239677 to 121239684 7 + TSS region transcription start site region 127281
Tssr127282 14 121239725 to 121239737 12 + TSS region transcription start site region 127282
Tssr127283 14 121239738 to 121239748 10 + TSS region transcription start site region 127283
B930095G15Rik 14 121248706 to 121253971 5265 + sense intronic lncRNA gene RIKEN cDNA B930095G15 gene
Tssr127284 14 121248729 to 121248733 4 + TSS region transcription start site region 127284
Tssr127285 14 121253142 to 121253153 11 + TSS region transcription start site region 127285
Stk24 14 121286343 to 121380011 93668 - protein coding gene serine/threonine kinase 24
Tssr130258 14 121286914 to 121286996 82 - TSS region transcription start site region 130258
Tssr130259 14 121287122 to 121287139 17 - TSS region transcription start site region 130259
Tssr130260 14 121288008 to 121288011 3 - TSS region transcription start site region 130260
Tssr130261 14 121294412 to 121294421 9 - TSS region transcription start site region 130261
Tssr130262 14 121303492 to 121303516 24 - TSS region transcription start site region 130262
Tssr130263 14 121340201 to 121340213 12 - TSS region transcription start site region 130263
Tssr130264 14 121370497 to 121370501 4 - TSS region transcription start site region 130264
Cpgi6882 14 121378244 to 121380069 1825 CpG island CpG island 6882
Tssr130265 14 121378938 to 121378998 60 - TSS region transcription start site region 130265
Tssr130266 14 121379126 to 121379137 11 - TSS region transcription start site region 130266
Tssr130267 14 121379195 to 121379200 5 - TSS region transcription start site region 130267
Tssr130268 14 121379206 to 121379269 63 - TSS region transcription start site region 130268
Gm49031 14 121385505 to 121385956 451 - pseudogene predicted gene, 49031
Gm33299 14 121451730 to 121455762 4032 - lincRNA gene predicted gene, 33299
Tssr130269 14 121456882 to 121456900 18 - TSS region transcription start site region 130269
Slc15a1 14 121459621 to 121505252 45631 - protein coding gene solute carrier family 15 (oligopeptide transporter), member 1
Tssr130270 14 121460129 to 121460134 5 - TSS region transcription start site region 130270
Tssr130271 14 121460428 to 121460454 26 - TSS region transcription start site region 130271
Tssr130272 14 121460509 to 121460522 13 - TSS region transcription start site region 130272
Cpgi6883 14 121504890 to 121505338 448 CpG island CpG island 6883
Tssr130273 14 121505247 to 121505264 17 - TSS region transcription start site region 130273
Gm49035 14 121507013 to 121519130 12117 - lincRNA gene predicted gene, 49035
Gm4529 14 121523544 to 121523748 204 + pseudogene predicted gene 4529
D14Mit178 14 121526909 to 121527057 148 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 178
Dock9 14 121542046 to 121797837 255791 - protein coding gene dedicator of cytokinesis 9