Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:119680411-120360976

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hs6st3 14 119138341 to 119869815 731474 + protein coding gene heparan sulfate 6-O-sulfotransferase 3
Tssr127210 14 119719337 to 119719342 5 + TSS region transcription start site region 127210
Tssr127211 14 119722367 to 119722371 4 + TSS region transcription start site region 127211
Tssr127212 14 119749226 to 119749238 12 + TSS region transcription start site region 127212
1700006F04Rik 14 119749227 to 119751564 2337 + sense intronic lncRNA gene RIKEN cDNA 1700006F04 gene
Gm48985 14 119784759 to 119785094 335 - pseudogene predicted gene, 48985
Gm41249 14 119796033 to 119798983 2950 - lncRNA gene predicted gene, 41249
4930404K13Rik 14 119798978 to 119817574 18596 + sense intronic lncRNA gene RIKEN cDNA 4930404K13 gene
Cpgi6869 14 119869182 to 119869510 328 CpG island CpG island 6869
Tssr127213 14 119875643 to 119875648 5 + TSS region transcription start site region 127213
Tssr127214 14 119875713 to 119875730 17 + TSS region transcription start site region 127214
D14Mit131.1 14 120006409 to 120006533 124 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 131.1
D14Mit131 14 120006565 to 120006669 104 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 131
Oxgr1 14 120019585 to 120042435 22850 - protein coding gene oxoglutarate (alpha-ketoglutarate) receptor 1
Gabarapl2-ps 14 120020411 to 120020976 565 - pseudogene GABA(A) receptor-associated protein-like 2 pseudogene
Tssr130251 14 120042429 to 120042471 42 - TSS region transcription start site region 130251
Gm20167 14 120077510 to 120077659 149 + pseudogene predicted gene, 20167
Gm4681 14 120089943 to 120142165 52222 - lincRNA gene predicted gene 4681
Gm48997 14 120129924 to 120130603 679 - lincRNA gene predicted gene, 48997
D14Dcr10 14 120135078 to 120135169 91 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 10
Cpgi6870 14 120137824 to 120138159 335 CpG island CpG island 6870
Cpgi6871 14 120139492 to 120139884 392 CpG island CpG island 6871
Gm41250 14 120153164 to 120172080 18916 + lncRNA gene predicted gene, 41250
Cpgi6872 14 120261634 to 120261877 243 CpG island CpG island 6872
Cpgi6873 14 120275392 to 120275808 416 CpG island CpG island 6873
Tssr127215 14 120275664 to 120275682 18 + TSS region transcription start site region 127215
Mbnl2 14 120275669 to 120431697 156028 + protein coding gene muscleblind like splicing factor 2
Tssr127216 14 120275698 to 120275714 16 + TSS region transcription start site region 127216
Tssr127217 14 120275759 to 120275769 10 + TSS region transcription start site region 127217
Tssr4528 14 120277150 to 120277161 11 - TSS region transcription start site region 4528
Tssr4529 14 120278952 to 120278965 13 - TSS region transcription start site region 4529
Tssr130252 14 120278975 to 120278986 11 - TSS region transcription start site region 130252
Tssr4530 14 120279002 to 120279013 11 - TSS region transcription start site region 4530
Tssr127218 14 120286953 to 120286957 4 + TSS region transcription start site region 127218
Tssr127219 14 120303321 to 120303347 26 + TSS region transcription start site region 127219
Tssr127220 14 120306445 to 120306461 16 + TSS region transcription start site region 127220
Tssr127221 14 120326557 to 120326578 21 + TSS region transcription start site region 127221
Tssr127222 14 120326629 to 120326642 13 + TSS region transcription start site region 127222
Tssr127223 14 120326687 to 120326732 45 + TSS region transcription start site region 127223
Cpgi6874 14 120330574 to 120330736 162 CpG island CpG island 6874
B930025B16Rik 14 120339699 to 120341676 1977 unclassified gene RIKEN cDNA B930025B16 gene
Tssr127224 14 120359435 to 120359452 17 + TSS region transcription start site region 127224