Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:118973341-120034815

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dnajc3 14 118937976 to 118981697 43721 + protein coding gene DnaJ heat shock protein family (Hsp40) member C3
Tssr127183 14 118981933 to 118981947 14 + TSS region transcription start site region 127183
Gm49768 14 118982994 to 118983760 766 - lincRNA gene predicted gene, 49768
Uggt2 14 118985039 to 119099430 114391 - protein coding gene UDP-glucose glycoprotein glucosyltransferase 2
Cpgi6864 14 119006471 to 119007067 596 CpG island CpG island 6864
Tssr130248 14 119007445 to 119007498 53 - TSS region transcription start site region 130248
Cpgi6865 14 119013118 to 119013320 202 CpG island CpG island 6865
Tssr130249 14 119034623 to 119034643 20 - TSS region transcription start site region 130249
Cpgi6866 14 119098810 to 119099982 1172 CpG island CpG island 6866
Gm16835 14 119098965 to 119115074 16109 + lncRNA gene predicted gene, 16835
Tssr130250 14 119099399 to 119099445 46 - TSS region transcription start site region 130250
Tssr127184 14 119099449 to 119099465 16 + TSS region transcription start site region 127184
Tssr127185 14 119099473 to 119099500 27 + TSS region transcription start site region 127185
Tssr127186 14 119108470 to 119108473 3 + TSS region transcription start site region 127186
Cpgi6867 14 119123611 to 119123776 165 CpG island CpG island 6867
Cpgi6868 14 119137430 to 119139218 1788 CpG island CpG island 6868
Tssr127187 14 119137544 to 119137551 7 + TSS region transcription start site region 127187
Tssr127188 14 119137675 to 119137701 26 + TSS region transcription start site region 127188
Tssr127189 14 119137704 to 119137725 21 + TSS region transcription start site region 127189
Tssr127190 14 119137799 to 119137815 16 + TSS region transcription start site region 127190
Tssr127191 14 119137828 to 119137841 13 + TSS region transcription start site region 127191
Tssr127192 14 119137871 to 119137915 44 + TSS region transcription start site region 127192
Hs6st3 14 119138341 to 119869815 731474 + protein coding gene heparan sulfate 6-O-sulfotransferase 3
Tssr127193 14 119156036 to 119156040 4 + TSS region transcription start site region 127193
Tssr127194 14 119156364 to 119156383 19 + TSS region transcription start site region 127194
Tssr127195 14 119169959 to 119169963 4 + TSS region transcription start site region 127195
Tssr127196 14 119172883 to 119172914 31 + TSS region transcription start site region 127196
Tssr127197 14 119173048 to 119173069 21 + TSS region transcription start site region 127197
Tssr127198 14 119268756 to 119268774 18 + TSS region transcription start site region 127198
Gm6087 14 119278424 to 119279086 662 + pseudogene predicted gene 6087
Tssr127199 14 119298957 to 119298978 21 + TSS region transcription start site region 127199
Tssr127200 14 119304072 to 119304075 3 + TSS region transcription start site region 127200
Tssr127201 14 119321559 to 119321570 11 + TSS region transcription start site region 127201
Tssr127202 14 119321641 to 119321652 11 + TSS region transcription start site region 127202
Tssr127203 14 119372936 to 119372940 4 + TSS region transcription start site region 127203
Tssr127204 14 119445622 to 119445631 9 + TSS region transcription start site region 127204
Tssr127205 14 119458328 to 119458342 14 + TSS region transcription start site region 127205
Tssr127206 14 119513141 to 119513143 2 + TSS region transcription start site region 127206
Tssr127207 14 119544498 to 119544502 4 + TSS region transcription start site region 127207
Gm6212 14 119644012 to 119644231 219 + pseudogene predicted gene 6212
Tssr127208 14 119644034 to 119644076 42 + TSS region transcription start site region 127208
Tssr127209 14 119655056 to 119655060 4 + TSS region transcription start site region 127209
Tssr127210 14 119719337 to 119719342 5 + TSS region transcription start site region 127210
Tssr127211 14 119722367 to 119722371 4 + TSS region transcription start site region 127211
Tssr127212 14 119749226 to 119749238 12 + TSS region transcription start site region 127212
1700006F04Rik 14 119749227 to 119751564 2337 + sense intronic lncRNA gene RIKEN cDNA 1700006F04 gene
Gm48985 14 119784759 to 119785094 335 - pseudogene predicted gene, 48985
Gm41249 14 119796033 to 119798983 2950 - lncRNA gene predicted gene, 41249
4930404K13Rik 14 119798978 to 119817574 18596 + sense intronic lncRNA gene RIKEN cDNA 4930404K13 gene
Cpgi6869 14 119869182 to 119869510 328 CpG island CpG island 6869
Tssr127213 14 119875643 to 119875648 5 + TSS region transcription start site region 127213
Tssr127214 14 119875713 to 119875730 17 + TSS region transcription start site region 127214
D14Mit131.1 14 120006409 to 120006533 124 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 131.1
D14Mit131 14 120006565 to 120006669 104 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 131
Oxgr1 14 120019585 to 120042435 22850 - protein coding gene oxoglutarate (alpha-ketoglutarate) receptor 1
Gabarapl2-ps 14 120020411 to 120020976 565 - pseudogene GABA(A) receptor-associated protein-like 2 pseudogene