Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:118744849-119125175

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46484 14 118748220 to 118755721 7501 - lncRNA gene predicted gene, 46484
Cpgi6858 14 118768237 to 118768456 219 CpG island CpG island 6858
Gm22379 14 118775152 to 118775282 130 + snoRNA gene predicted gene, 22379
Cldn10 14 118787871 to 118874525 86654 + protein coding gene claudin 10
Tssr127171 14 118787894 to 118787942 48 + TSS region transcription start site region 127171
Tssr127172 14 118787946 to 118787951 5 + TSS region transcription start site region 127172
Tssr4527 14 118787959 to 118787962 3 + TSS region transcription start site region 4527
Gm41248 14 118808500 to 118810387 1887 - lncRNA gene predicted gene, 41248
Gm32382 14 118815311 to 118820245 4934 - lncRNA gene predicted gene, 32382
n-R5s51 14 118826909 to 118827031 122 - rRNA gene nuclear encoded rRNA 5S 51
Tssr130237 14 118853144 to 118853156 12 - TSS region transcription start site region 130237
Cpgi6859 14 118854403 to 118855610 1207 CpG island CpG island 6859
Tssr127173 14 118854695 to 118854700 5 + TSS region transcription start site region 127173
Tssr130238 14 118854842 to 118854856 14 - TSS region transcription start site region 130238
Tssr127174 14 118854955 to 118854976 21 + TSS region transcription start site region 127174
Dzip1 14 118875520 to 118925460 49940 - protein coding gene DAZ interacting protein 1
Gm49179 14 118875882 to 118880860 4978 + antisense lncRNA gene predicted gene, 49179
Tssr130239 14 118876661 to 118876665 4 - TSS region transcription start site region 130239
Tssr130240 14 118876893 to 118876896 3 - TSS region transcription start site region 130240
Tssr130241 14 118917507 to 118917534 27 - TSS region transcription start site region 130241
Tssr130242 14 118917552 to 118917569 17 - TSS region transcription start site region 130242
Cpgi6860 14 118922376 to 118923391 1015 CpG island CpG island 6860
Tssr130243 14 118923070 to 118923105 35 - TSS region transcription start site region 130243
Cpgi6861 14 118924885 to 118925543 658 CpG island CpG island 6861
Tssr130244 14 118925300 to 118925319 19 - TSS region transcription start site region 130244
Tssr130245 14 118925324 to 118925345 21 - TSS region transcription start site region 130245
Tssr130246 14 118925462 to 118925479 17 - TSS region transcription start site region 130246
Cpgi6862 14 118934849 to 118935175 326 CpG island CpG island 6862
Cpgi6863 14 118937361 to 118938800 1439 CpG island CpG island 6863
Tssr130247 14 118937739 to 118937772 33 - TSS region transcription start site region 130247
Tssr127175 14 118937925 to 118937992 67 + TSS region transcription start site region 127175
Dnajc3 14 118937976 to 118981697 43721 + protein coding gene DnaJ heat shock protein family (Hsp40) member C3
Gm4678 14 118950203 to 118952982 2779 + pseudogene predicted gene 4678
Tssr127176 14 118952334 to 118952360 26 + TSS region transcription start site region 127176
Tssr127177 14 118953152 to 118953166 14 + TSS region transcription start site region 127177
Tssr127178 14 118953214 to 118953229 15 + TSS region transcription start site region 127178
Tssr127179 14 118953428 to 118953442 14 + TSS region transcription start site region 127179
Tssr127180 14 118953485 to 118953505 20 + TSS region transcription start site region 127180
Tssr127181 14 118953513 to 118953536 23 + TSS region transcription start site region 127181
Tssr127182 14 118971897 to 118971900 3 + TSS region transcription start site region 127182
Tssr127183 14 118981933 to 118981947 14 + TSS region transcription start site region 127183
Gm49768 14 118982994 to 118983760 766 - lincRNA gene predicted gene, 49768
Uggt2 14 118985039 to 119099430 114391 - protein coding gene UDP-glucose glycoprotein glucosyltransferase 2
Cpgi6864 14 119006471 to 119007067 596 CpG island CpG island 6864
Tssr130248 14 119007445 to 119007498 53 - TSS region transcription start site region 130248
Cpgi6865 14 119013118 to 119013320 202 CpG island CpG island 6865
Tssr130249 14 119034623 to 119034643 20 - TSS region transcription start site region 130249
Cpgi6866 14 119098810 to 119099982 1172 CpG island CpG island 6866
Gm16835 14 119098965 to 119115074 16109 + lncRNA gene predicted gene, 16835
Tssr130250 14 119099399 to 119099445 46 - TSS region transcription start site region 130250
Tssr127184 14 119099449 to 119099465 16 + TSS region transcription start site region 127184
Tssr127185 14 119099473 to 119099500 27 + TSS region transcription start site region 127185
Tssr127186 14 119108470 to 119108473 3 + TSS region transcription start site region 127186
Cpgi6867 14 119123611 to 119123776 165 CpG island CpG island 6867