Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:118170405-118570413

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Opfaq4 14 110973777 to 118462433 7488656 QTL open field activity QTL 4
Cpgi6847 14 118175092 to 118175550 458 CpG island CpG island 6847
Cpgi6848 14 118180417 to 118180576 159 CpG island CpG island 6848
Gm4674 14 118181507 to 118182129 622 - pseudogene predicted gene 4674
4933431J24Rik 14 118209378 to 118213145 3767 + lincRNA gene RIKEN cDNA 4933431J24 gene
Gm31981 14 118210421 to 118211529 1108 - lncRNA gene predicted gene, 31981
Tssr130218 14 118211670 to 118211679 9 - TSS region transcription start site region 130218
Tssr127168 14 118212339 to 118212350 11 + TSS region transcription start site region 127168
Gm32045 14 118222761 to 118226364 3603 - lncRNA gene predicted gene, 32045
Tssr130219 14 118223897 to 118223947 50 - TSS region transcription start site region 130219
Cpgi6849 14 118225615 to 118226282 667 CpG island CpG island 6849
Cpgi6850 14 118231128 to 118231735 607 CpG island CpG island 6850
Sox21 14 118233233 to 118237030 3797 - protein coding gene SRY (sex determining region Y)-box 21
Cpgi6851 14 118234247 to 118237450 3203 CpG island CpG island 6851
Tssr130220 14 118236118 to 118236145 27 - TSS region transcription start site region 130220
Tssr130221 14 118236216 to 118236242 26 - TSS region transcription start site region 130221
Gm4675 14 118236232 to 118261199 24967 + lincRNA gene predicted gene 4675
Tssr130222 14 118236638 to 118236663 25 - TSS region transcription start site region 130222
Tssr130223 14 118236961 to 118236970 9 - TSS region transcription start site region 130223
Tssr130224 14 118236992 to 118237013 21 - TSS region transcription start site region 130224
Tssr130225 14 118237016 to 118237035 19 - TSS region transcription start site region 130225
Tssr130226 14 118237038 to 118237047 9 - TSS region transcription start site region 130226
Tssr4523 14 118253963 to 118253969 6 + TSS region transcription start site region 4523
Mir6241 14 118258634 to 118258736 102 + miRNA gene microRNA 6241
Gm9376 14 118267158 to 118267779 621 + protein coding gene predicted gene 9376
1700027M17Rik 14 118279291 to 118279536 245 unclassified gene RIKEN cDNA 1700027M17 gene
Gm23669 14 118299990 to 118300117 127 + snoRNA gene predicted gene, 23669
Gm32093 14 118322977 to 118325899 2922 + lincRNA gene predicted gene, 32093
Gm26791 14 118363732 to 118384768 21036 + lincRNA gene predicted gene, 26791
1700044C05Rik 14 118365878 to 118398165 32287 + lincRNA gene RIKEN cDNA 1700044C05 gene
Tssr130227 14 118368565 to 118368568 3 - TSS region transcription start site region 130227
Tssr130228 14 118370405 to 118370413 8 - TSS region transcription start site region 130228
Gm5672 14 118375263 to 118376196 933 - pseudogene predicted gene 5672
Cpgi6852 14 118421286 to 118421450 164 CpG island CpG island 6852
Tssr4524 14 118428376 to 118428382 6 + TSS region transcription start site region 4524
D14Mit97 14 118434142 to 118434278 136 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 97
D14Dcr9 14 118434159 to 118434263 104 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 9
Cpgi6853 14 118436789 to 118437768 979 CpG island CpG island 6853
Tssr4525 14 118457496 to 118457499 3 + TSS region transcription start site region 4525
Cpgi6854 14 118473227 to 118474291 1064 CpG island CpG island 6854
Abcc4 14 118482692 to 118706219 223527 - protein coding gene ATP-binding cassette, sub-family C (CFTR/MRP), member 4
Tssr130229 14 118511389 to 118511392 3 - TSS region transcription start site region 130229
Tssr127169 14 118543243 to 118543247 4 + TSS region transcription start site region 127169
Gm49033 14 118564072 to 118564343 271 + pseudogene predicted gene, 49033