Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:117872996-118153007

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gpc6 14 116925315 to 117976544 1051229 + protein coding gene glypican 6
5730405N03Rik 14 117902759 to 117904986 2227 unclassified non-coding RNA gene RIKEN cDNA 5730405N03 gene
Mir6239 14 117953743 to 117953847 104 - miRNA gene microRNA 6239
Cpgi6843 14 118001333 to 118001588 255 CpG island CpG island 6843
D14Dcr8 14 118008530 to 118008625 95 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 8
Dct 14 118012790 to 118052244 39454 - protein coding gene dopachrome tautomerase
Tssr130207 14 118012823 to 118012837 14 - TSS region transcription start site region 130207
Tssr130208 14 118012996 to 118013007 11 - TSS region transcription start site region 130208
Tssr130209 14 118030685 to 118030687 2 - TSS region transcription start site region 130209
4930435M08Rik 14 118044974 to 118046864 1890 + antisense lncRNA gene RIKEN cDNA 4930435M08 gene
Tssr130210 14 118051996 to 118051999 3 - TSS region transcription start site region 130210
Tssr130211 14 118052024 to 118052027 3 - TSS region transcription start site region 130211
Tssr130212 14 118052041 to 118052063 22 - TSS region transcription start site region 130212
Tssr4522 14 118052088 to 118052097 9 - TSS region transcription start site region 4522
Tssr130213 14 118052145 to 118052154 9 - TSS region transcription start site region 130213
Tssr130214 14 118052235 to 118052253 18 - TSS region transcription start site region 130214
1700008A07Rik 14 118088569 to 118089272 703 unclassified gene RIKEN cDNA 1700008A07 gene
Cpgi6844 14 118088896 to 118089973 1077 CpG island CpG island 6844
n-TFgaa5 14 118089525 to 118089597 72 - tRNA gene nuclear encoded tRNA pheylalanine 5 (anticodon GAA)
Tssr127165 14 118089674 to 118089702 28 + TSS region transcription start site region 127165
Gm31633 14 118090783 to 118095154 4371 + lncRNA gene predicted gene, 31633
2700005E23Rik 14 118091132 to 118091776 644 unclassified gene RIKEN cDNA 2700005E23 gene
Tssr127166 14 118098455 to 118098460 5 + TSS region transcription start site region 127166
Gm26773 14 118107831 to 118117100 9269 + lincRNA gene predicted gene, 26773
Tssr130215 14 118108588 to 118108594 6 - TSS region transcription start site region 130215
Tgds 14 118111911 to 118132755 20844 - protein coding gene TDP-glucose 4,6-dehydratase
Cpgi6845 14 118132540 to 118132935 395 CpG island CpG island 6845
Tssr130216 14 118132733 to 118132761 28 - TSS region transcription start site region 130216
Tssr130217 14 118132763 to 118132774 11 - TSS region transcription start site region 130217
Cpgi6846 14 118136458 to 118137672 1214 CpG island CpG island 6846
Tssr127167 14 118137101 to 118137178 77 + TSS region transcription start site region 127167
Gpr180 14 118137158 to 118163261 26103 + protein coding gene G protein-coupled receptor 180