Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:117210574-118121028

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gpc6 14 116925315 to 117976544 1051229 + protein coding gene glypican 6
Tssr127154 14 117240678 to 117240720 42 + TSS region transcription start site region 127154
Tssr127155 14 117242108 to 117242111 3 + TSS region transcription start site region 127155
Tssr127156 14 117269686 to 117269702 16 + TSS region transcription start site region 127156
Tssr127157 14 117324723 to 117324724 1 + TSS region transcription start site region 127157
Tssr4520 14 117331095 to 117331101 6 + TSS region transcription start site region 4520
Tssr127158 14 117350332 to 117350339 7 + TSS region transcription start site region 127158
Tssr127159 14 117368209 to 117368212 3 + TSS region transcription start site region 127159
Tssr127160 14 117370910 to 117370938 28 + TSS region transcription start site region 127160
Tssr127161 14 117386106 to 117386154 48 + TSS region transcription start site region 127161
D14Mit76 14 117430929 to 117431124 195 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 76
4932442G11Rik 14 117470187 to 117477952 7765 unclassified gene RIKEN cDNA 4932442G11 gene
D14Dcr7 14 117525375 to 117525476 101 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 7
Tssr127162 14 117527479 to 117527497 18 + TSS region transcription start site region 127162
Tssr4521 14 117527619 to 117527637 18 + TSS region transcription start site region 4521
3110035F07Rik 14 117665574 to 117666028 454 unclassified gene RIKEN cDNA 3110035F07 gene
Tssr127163 14 117679969 to 117679973 4 + TSS region transcription start site region 127163
Tssr127164 14 117826878 to 117826911 33 + TSS region transcription start site region 127164
5730405N03Rik 14 117902759 to 117904986 2227 unclassified non-coding RNA gene RIKEN cDNA 5730405N03 gene
Mir6239 14 117953743 to 117953847 104 - miRNA gene microRNA 6239
Cpgi6843 14 118001333 to 118001588 255 CpG island CpG island 6843
D14Dcr8 14 118008530 to 118008625 95 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 8
Dct 14 118012790 to 118052244 39454 - protein coding gene dopachrome tautomerase
Tssr130207 14 118012823 to 118012837 14 - TSS region transcription start site region 130207
Tssr130208 14 118012996 to 118013007 11 - TSS region transcription start site region 130208
Tssr130209 14 118030685 to 118030687 2 - TSS region transcription start site region 130209
4930435M08Rik 14 118044974 to 118046864 1890 + antisense lncRNA gene RIKEN cDNA 4930435M08 gene
Tssr130210 14 118051996 to 118051999 3 - TSS region transcription start site region 130210
Tssr130211 14 118052024 to 118052027 3 - TSS region transcription start site region 130211
Tssr130212 14 118052041 to 118052063 22 - TSS region transcription start site region 130212
Tssr4522 14 118052088 to 118052097 9 - TSS region transcription start site region 4522
Tssr130213 14 118052145 to 118052154 9 - TSS region transcription start site region 130213
Tssr130214 14 118052235 to 118052253 18 - TSS region transcription start site region 130214
1700008A07Rik 14 118088569 to 118089272 703 unclassified gene RIKEN cDNA 1700008A07 gene
Cpgi6844 14 118088896 to 118089973 1077 CpG island CpG island 6844
n-TFgaa5 14 118089525 to 118089597 72 - tRNA gene nuclear encoded tRNA pheylalanine 5 (anticodon GAA)
Tssr127165 14 118089674 to 118089702 28 + TSS region transcription start site region 127165
Gm31633 14 118090783 to 118095154 4371 + lncRNA gene predicted gene, 31633
2700005E23Rik 14 118091132 to 118091776 644 unclassified gene RIKEN cDNA 2700005E23 gene
Tssr127166 14 118098455 to 118098460 5 + TSS region transcription start site region 127166
Gm26773 14 118107831 to 118117100 9269 + lincRNA gene predicted gene, 26773
Tssr130215 14 118108588 to 118108594 6 - TSS region transcription start site region 130215
Tgds 14 118111911 to 118132755 20844 - protein coding gene TDP-glucose 4,6-dehydratase