Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:116328520-117808528

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gpc5 14 115092215 to 116525179 1432964 + protein coding gene glypican 5
D14Mit199 14 116353862 to 116354036 174 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 199
Tssr127139 14 116394995 to 116394996 1 + TSS region transcription start site region 127139
D14Mit177 14 116445034 to 116445213 179 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 177
2900036C06Rik 14 116471847 to 116472262 415 unclassified gene RIKEN cDNA 2900036C06 gene
Tssr127140 14 116529380 to 116529385 5 + TSS region transcription start site region 127140
Gm18712 14 116729367 to 116729876 509 + pseudogene predicted gene, 18712
Gm38045 14 116750215 to 116751129 914 + unclassified gene predicted gene, 38045
Gm18836 14 116858715 to 116859400 685 - pseudogene predicted gene, 18836
Cpgi6842 14 116925169 to 116927206 2037 CpG island CpG island 6842
Tssr127141 14 116925205 to 116925218 13 + TSS region transcription start site region 127141
Tssr127142 14 116925259 to 116925280 21 + TSS region transcription start site region 127142
Tssr127143 14 116925291 to 116925362 71 + TSS region transcription start site region 127143
Gpc6 14 116925315 to 117976544 1051229 + protein coding gene glypican 6
Tssr127144 14 116925379 to 116925394 15 + TSS region transcription start site region 127144
Tssr127145 14 116925505 to 116925513 8 + TSS region transcription start site region 127145
Tssr127146 14 116925516 to 116925543 27 + TSS region transcription start site region 127146
Tssr127147 14 116925545 to 116925554 9 + TSS region transcription start site region 127147
Tssr127148 14 116925558 to 116925571 13 + TSS region transcription start site region 127148
Tssr127149 14 116925772 to 116925789 17 + TSS region transcription start site region 127149
Tssr127150 14 116925803 to 116925872 69 + TSS region transcription start site region 127150
Tssr130206 14 116947989 to 116947994 5 - TSS region transcription start site region 130206
Tssr127151 14 117004576 to 117004580 4 + TSS region transcription start site region 127151
Tssr127152 14 117063129 to 117063133 4 + TSS region transcription start site region 127152
Tssr127153 14 117068520 to 117068528 8 + TSS region transcription start site region 127153
Gm41246 14 117087362 to 117090849 3487 + lncRNA gene predicted gene, 41246
8430413D17Rik 14 117203792 to 117207670 3878 unclassified gene RIKEN cDNA 8430413D17 gene
Tssr127154 14 117240678 to 117240720 42 + TSS region transcription start site region 127154
Tssr127155 14 117242108 to 117242111 3 + TSS region transcription start site region 127155
Tssr127156 14 117269686 to 117269702 16 + TSS region transcription start site region 127156
Tssr127157 14 117324723 to 117324724 1 + TSS region transcription start site region 127157
Tssr4520 14 117331095 to 117331101 6 + TSS region transcription start site region 4520
Tssr127158 14 117350332 to 117350339 7 + TSS region transcription start site region 127158
Tssr127159 14 117368209 to 117368212 3 + TSS region transcription start site region 127159
Tssr127160 14 117370910 to 117370938 28 + TSS region transcription start site region 127160
Tssr127161 14 117386106 to 117386154 48 + TSS region transcription start site region 127161
D14Mit76 14 117430929 to 117431124 195 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 76
4932442G11Rik 14 117470187 to 117477952 7765 unclassified gene RIKEN cDNA 4932442G11 gene
D14Dcr7 14 117525375 to 117525476 101 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 7
Tssr127162 14 117527479 to 117527497 18 + TSS region transcription start site region 127162
Tssr4521 14 117527619 to 117527637 18 + TSS region transcription start site region 4521
3110035F07Rik 14 117665574 to 117666028 454 unclassified gene RIKEN cDNA 3110035F07 gene
Tssr127163 14 117679969 to 117679973 4 + TSS region transcription start site region 127163