Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:115041708-116361719

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi6840 14 115040229 to 115042566 2337 CpG island CpG island 6840
Tssr127128 14 115042275 to 115042287 12 + TSS region transcription start site region 127128
Tssr127129 14 115042752 to 115042756 4 + TSS region transcription start site region 127129
Tssr127130 14 115043483 to 115043487 4 + TSS region transcription start site region 127130
Mir17 14 115043671 to 115043754 83 + miRNA gene microRNA 17
Mirc1 14 115043671 to 115044506 835 complex/cluster/region microRNA cluster 1, including Mir17 through Mir92-1
Mir18 14 115043851 to 115043946 95 + miRNA gene microRNA 18
Mir19a 14 115044000 to 115044081 81 + miRNA gene microRNA 19a
Mir20a 14 115044157 to 115044263 106 + miRNA gene microRNA 20a
Mir19b-1 14 115044305 to 115044391 86 + miRNA gene microRNA 19b-1
Mir17hg 14 115044390 to 115046728 2338 + lincRNA gene Mir17 host gene (non-protein coding)
Mir92-1 14 115044427 to 115044506 79 + miRNA gene microRNA 92-1
Tssr127131 14 115044497 to 115044500 3 + TSS region transcription start site region 127131
Cpgi6841 14 115092056 to 115092989 933 CpG island CpG island 6841
Gpc5 14 115092215 to 116525179 1432964 + protein coding gene glypican 5
Tssr127132 14 115092244 to 115092278 34 + TSS region transcription start site region 127132
Tssr127133 14 115092289 to 115092296 7 + TSS region transcription start site region 127133
D14Mit96 14 115127355 to 115127503 148 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 96
Tssr127134 14 115201586 to 115201593 7 + TSS region transcription start site region 127134
Tssr130197 14 115207537 to 115207546 9 - TSS region transcription start site region 130197
4930505G20Rik 14 115396551 to 115409552 13001 - lncRNA gene RIKEN cDNA 4930505G20 gene
Tssr130198 14 115471862 to 115471876 14 - TSS region transcription start site region 130198
Tssr130199 14 115477477 to 115477495 18 - TSS region transcription start site region 130199
Tssr130200 14 115477540 to 115477551 11 - TSS region transcription start site region 130200
Tssr130201 14 115477585 to 115477600 15 - TSS region transcription start site region 130201
Tssr130202 14 115477611 to 115477616 5 - TSS region transcription start site region 130202
Tssr130203 14 115477640 to 115477647 7 - TSS region transcription start site region 130203
Gm18367 14 115555923 to 115556522 599 - pseudogene predicted gene, 18367
Tssr127135 14 115623065 to 115623070 5 + TSS region transcription start site region 127135
Tssr130204 14 115701708 to 115701719 11 - TSS region transcription start site region 130204
Gm18321 14 115772305 to 115773046 741 + pseudogene predicted gene, 18321
Gm20713 14 115788144 to 115871278 83134 - unclassified non-coding RNA gene predicted gene 20713
Tssr127136 14 115868764 to 115868767 3 + TSS region transcription start site region 127136
Tssr127137 14 115942595 to 115942598 3 + TSS region transcription start site region 127137
Tssr127138 14 115994943 to 115994947 4 + TSS region transcription start site region 127138
Tssr130205 14 116065952 to 116065953 1 - TSS region transcription start site region 130205
D14Mit118 14 116226745 to 116226882 137 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 118
D14Mit199 14 116353862 to 116354036 174 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 199