Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:11358532-12437041

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D14Mit1 14 11369444 to 11369550 106 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 1
Gm48592 14 11392560 to 11392925 365 + pseudogene predicted gene, 48592
Gm48594 14 11460359 to 11502992 42633 + lincRNA gene predicted gene, 48594
Gm8438 14 11491076 to 11491657 581 - pseudogene predicted gene 8438
Gm48595 14 11510535 to 11520770 10235 - lincRNA gene predicted gene, 48595
Cpgi6163 14 11552671 to 11555315 2644 CpG island CpG island 6163
Tssr124258 14 11553461 to 11553484 23 + TSS region transcription start site region 124258
Tssr124259 14 11553499 to 11553514 15 + TSS region transcription start site region 124259
Tssr124260 14 11553523 to 11553542 19 + TSS region transcription start site region 124260
Bomd2 14 11553553 to 12242040 688487 QTL bone mineral density 2
Ptprg 14 11553553 to 12242040 688487 + protein coding gene protein tyrosine phosphatase, receptor type, G
Tssr124261 14 11553555 to 11553564 9 + TSS region transcription start site region 124261
Tssr124262 14 11553568 to 11553597 29 + TSS region transcription start site region 124262
Tssr124263 14 11553598 to 11553615 17 + TSS region transcription start site region 124263
Tssr124264 14 11553702 to 11553773 71 + TSS region transcription start site region 124264
Cpgi6164 14 11555654 to 11555906 252 CpG island CpG island 6164
Cpgi6165 14 11556281 to 11556747 466 CpG island CpG island 6165
Tssr124265 14 11570018 to 11570031 13 + TSS region transcription start site region 124265
Tssr124266 14 11570039 to 11570051 12 + TSS region transcription start site region 124266
Tssr124267 14 11570100 to 11570115 15 + TSS region transcription start site region 124267
Tssr124268 14 11604056 to 11604060 4 + TSS region transcription start site region 124268
Tssr124269 14 11617662 to 11617691 29 + TSS region transcription start site region 124269
Tssr124270 14 11618625 to 11618629 4 + TSS region transcription start site region 124270
Tssr124271 14 11640120 to 11640121 1 + TSS region transcription start site region 124271
Tssr124272 14 11697053 to 11697057 4 + TSS region transcription start site region 124272
Gm48602 14 11767943 to 11771311 3368 + unclassified gene predicted gene, 48602
Tssr124273 14 11814525 to 11814528 3 + TSS region transcription start site region 124273
Tssr124274 14 11824362 to 11824367 5 + TSS region transcription start site region 124274
Gm48601 14 11867594 to 11870625 3031 + unclassified gene predicted gene, 48601
Gm48600 14 11904679 to 11909158 4479 + unclassified gene predicted gene, 48600
Gm3848 14 11965446 to 11981223 15777 - antisense lncRNA gene predicted gene 3848
Tssr127451 14 11981225 to 11981232 7 - TSS region transcription start site region 127451
Tssr124275 14 11986236 to 11986240 4 + TSS region transcription start site region 124275
Tssr124276 14 12046045 to 12046049 4 + TSS region transcription start site region 124276
Sluc40 14 12089820 to 12089969 149 QTL susceptibility to lung cancer 40
D14Mit11 14 12089820 to 12089969 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 11
Gm48603 14 12151447 to 12152584 1137 - unclassified gene predicted gene, 48603
Tssr124277 14 12189948 to 12189953 5 + TSS region transcription start site region 124277
Tssr124278 14 12189969 to 12190001 32 + TSS region transcription start site region 124278
Tssr124279 14 12190003 to 12190025 22 + TSS region transcription start site region 124279
Tssr124280 14 12190042 to 12190047 5 + TSS region transcription start site region 124280
D14Mit108 14 12242322 to 12242454 132 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 108
Gm49355 14 12283976 to 12324454 40478 + protein coding gene predicted gene, 49355
Cpgi6166 14 12284042 to 12284783 741 CpG island CpG island 6166
3830406C13Rik 14 12284173 to 12303231 19058 + protein coding gene RIKEN cDNA 3830406C13 gene
Tssr124281 14 12284177 to 12284194 17 + TSS region transcription start site region 124281
Tssr124282 14 12284198 to 12284239 41 + TSS region transcription start site region 124282
Tssr124283 14 12284242 to 12284271 29 + TSS region transcription start site region 124283
Tssr124284 14 12301312 to 12301319 7 + TSS region transcription start site region 124284
D030051J21Rik 14 12321379 to 12324473 3094 + lincRNA gene RIKEN cDNA D030051J21 gene
Gm24578 14 12333776 to 12333904 128 - snoRNA gene predicted gene, 24578
Cpgi6167 14 12341071 to 12341776 705 CpG island CpG island 6167
Fezf2 14 12341892 to 12345865 3973 - protein coding gene Fez family zinc finger 2
Tssr127452 14 12343313 to 12343318 5 - TSS region transcription start site region 127452
Cpgi6168 14 12343607 to 12343914 307 CpG island CpG island 6168
Tssr127453 14 12343730 to 12343749 19 - TSS region transcription start site region 127453
Cpgi6169 14 12344403 to 12346584 2181 CpG island CpG island 6169
Tssr127454 14 12344838 to 12344846 8 - TSS region transcription start site region 127454
Tssr127455 14 12345245 to 12345255 10 - TSS region transcription start site region 127455
Tssr127456 14 12345633 to 12345671 38 - TSS region transcription start site region 127456
Tssr127457 14 12345727 to 12345740 13 - TSS region transcription start site region 127457
Tssr127458 14 12345780 to 12345789 9 - TSS region transcription start site region 127458
Tssr127459 14 12345809 to 12345833 24 - TSS region transcription start site region 127459
Tssr127460 14 12345847 to 12345872 25 - TSS region transcription start site region 127460
Tssr127461 14 12346094 to 12346116 22 - TSS region transcription start site region 127461
Tssr127462 14 12346645 to 12346651 6 - TSS region transcription start site region 127462
Cpgi6170 14 12347369 to 12347562 193 CpG island CpG island 6170
Cadps 14 12372563 to 12823079 450516 - protein coding gene Ca2+-dependent secretion activator
Gm48239 14 12374585 to 12384729 10144 + antisense lncRNA gene predicted gene, 48239
Gm48267 14 12400698 to 12402230 1532 - unclassified gene predicted gene, 48267
n-R5s45 14 12427532 to 12427641 109 - rRNA gene nuclear encoded rRNA 5S 45