Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:112699650-116979856

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100 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41243 14 112687577 to 112721680 34103 - lncRNA gene predicted gene, 41243
Tssr130191 14 112919101 to 112919105 4 - TSS region transcription start site region 130191
Gm4486 14 112957368 to 112958203 835 + pseudogene predicted gene 4486
D14Mit200 14 113121224 to 113121371 147 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 200
Gm49005 14 113128821 to 113129193 372 + pseudogene predicted gene, 49005
Tpm3-rs7 14 113314601 to 113316720 2119 + pseudogene tropomyosin 3, related sequence 7
Tssr127116 14 113314602 to 113314608 6 + TSS region transcription start site region 127116
Tssr127117 14 113315024 to 113315056 32 + TSS region transcription start site region 127117
Tssr127118 14 113315088 to 113315129 41 + TSS region transcription start site region 127118
Gm4487 14 113490219 to 113490660 441 - pseudogene predicted gene 4487
Tssr4518 14 113574527 to 113574530 3 + TSS region transcription start site region 4518
Tssr127119 14 113900972 to 113900989 17 + TSS region transcription start site region 127119
Gm5209 14 113902027 to 113902746 719 + pseudogene predicted gene 5209
Gm18369 14 114172446 to 114173017 571 + pseudogene predicted gene, 18369
Gm9363 14 114225304 to 114225945 641 - pseudogene predicted gene 9363
Gm19829 14 114308700 to 114310803 2103 - pseudogene predicted gene, 19829
Gm29713 14 114607292 to 114611780 4488 + pseudogene predicted gene, 29713
Gm41244 14 114766661 to 114846023 79362 - lncRNA gene predicted gene, 41244
Gm37495 14 114820962 to 114821225 263 - unclassified gene predicted gene, 37495
D14Dcr6 14 114828510 to 114828616 106 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 6
4930524C18Rik 14 114831965 to 114861327 29362 + lincRNA gene RIKEN cDNA 4930524C18 gene
Cpgi6839 14 114832040 to 114832409 369 CpG island CpG island 6839
D14Ertd24e 14 114839650 to 114839856 206 DNA segment DNA segment, Chr 14, ERATO Doi 24, expressed
Tssr130192 14 114842533 to 114842540 7 - TSS region transcription start site region 130192
Gm31003 14 114864000 to 114867715 3715 + lncRNA gene predicted gene, 31003
Gm49010 14 114874944 to 114876510 1566 - lincRNA gene predicted gene, 49010
1700100I10Rik 14 114940227 to 114945948 5721 - lincRNA gene RIKEN cDNA 1700100I10 gene
Tssr130193 14 114945922 to 114945938 16 - TSS region transcription start site region 130193
Tssr130194 14 114945940 to 114945948 8 - TSS region transcription start site region 130194
Tssr130195 14 114945951 to 114945958 7 - TSS region transcription start site region 130195
Tssr127120 14 114945993 to 114946004 11 + TSS region transcription start site region 127120
Gm31072 14 114946008 to 114947579 1571 + lincRNA gene predicted gene, 31072
Tssr127121 14 114946012 to 114946030 18 + TSS region transcription start site region 127121
Tssr127122 14 114946037 to 114946042 5 + TSS region transcription start site region 127122
Tssr127123 14 114946046 to 114946058 12 + TSS region transcription start site region 127123
Tssr4519 14 114946059 to 114946063 4 + TSS region transcription start site region 4519
Tssr130196 14 114948977 to 114949012 35 - TSS region transcription start site region 130196
Tssr127124 14 114949043 to 114949084 41 + TSS region transcription start site region 127124
Gm24073 14 114980428 to 114980533 105 - snRNA gene predicted gene, 24073
Cpgi6840 14 115040229 to 115042566 2337 CpG island CpG island 6840
Tssr127125 14 115040277 to 115040288 11 + TSS region transcription start site region 127125
Tssr127126 14 115040294 to 115040329 35 + TSS region transcription start site region 127126
Tssr127127 14 115040961 to 115040978 17 + TSS region transcription start site region 127127
Tssr127128 14 115042275 to 115042287 12 + TSS region transcription start site region 127128
Tssr127129 14 115042752 to 115042756 4 + TSS region transcription start site region 127129
Tssr127130 14 115043483 to 115043487 4 + TSS region transcription start site region 127130
Mir17 14 115043671 to 115043754 83 + miRNA gene microRNA 17
Mirc1 14 115043671 to 115044506 835 complex/cluster/region microRNA cluster 1, including Mir17 through Mir92-1
Mir18 14 115043851 to 115043946 95 + miRNA gene microRNA 18
Mir19a 14 115044000 to 115044081 81 + miRNA gene microRNA 19a
Mir20a 14 115044157 to 115044263 106 + miRNA gene microRNA 20a
Mir19b-1 14 115044305 to 115044391 86 + miRNA gene microRNA 19b-1
Mir17hg 14 115044390 to 115046728 2338 + lincRNA gene Mir17 host gene (non-protein coding)
Mir92-1 14 115044427 to 115044506 79 + miRNA gene microRNA 92-1
Tssr127131 14 115044497 to 115044500 3 + TSS region transcription start site region 127131
Cpgi6841 14 115092056 to 115092989 933 CpG island CpG island 6841
Gpc5 14 115092215 to 116525179 1432964 + protein coding gene glypican 5
Tssr127132 14 115092244 to 115092278 34 + TSS region transcription start site region 127132
Tssr127133 14 115092289 to 115092296 7 + TSS region transcription start site region 127133
D14Mit96 14 115127355 to 115127503 148 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 96
Tssr127134 14 115201586 to 115201593 7 + TSS region transcription start site region 127134
Tssr130197 14 115207537 to 115207546 9 - TSS region transcription start site region 130197
4930505G20Rik 14 115396551 to 115409552 13001 - lncRNA gene RIKEN cDNA 4930505G20 gene
Tssr130198 14 115471862 to 115471876 14 - TSS region transcription start site region 130198
Tssr130199 14 115477477 to 115477495 18 - TSS region transcription start site region 130199
Tssr130200 14 115477540 to 115477551 11 - TSS region transcription start site region 130200
Tssr130201 14 115477585 to 115477600 15 - TSS region transcription start site region 130201
Tssr130202 14 115477611 to 115477616 5 - TSS region transcription start site region 130202
Tssr130203 14 115477640 to 115477647 7 - TSS region transcription start site region 130203
Gm18367 14 115555923 to 115556522 599 - pseudogene predicted gene, 18367
Tssr127135 14 115623065 to 115623070 5 + TSS region transcription start site region 127135
Tssr130204 14 115701708 to 115701719 11 - TSS region transcription start site region 130204
Gm18321 14 115772305 to 115773046 741 + pseudogene predicted gene, 18321
Gm20713 14 115788144 to 115871278 83134 - unclassified non-coding RNA gene predicted gene 20713
Tssr127136 14 115868764 to 115868767 3 + TSS region transcription start site region 127136
Tssr127137 14 115942595 to 115942598 3 + TSS region transcription start site region 127137
Tssr127138 14 115994943 to 115994947 4 + TSS region transcription start site region 127138
Tssr130205 14 116065952 to 116065953 1 - TSS region transcription start site region 130205
D14Mit118 14 116226745 to 116226882 137 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 118
D14Mit199 14 116353862 to 116354036 174 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 199
Tssr127139 14 116394995 to 116394996 1 + TSS region transcription start site region 127139
D14Mit177 14 116445034 to 116445213 179 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 177
2900036C06Rik 14 116471847 to 116472262 415 unclassified gene RIKEN cDNA 2900036C06 gene
Tssr127140 14 116529380 to 116529385 5 + TSS region transcription start site region 127140
Gm18712 14 116729367 to 116729876 509 + pseudogene predicted gene, 18712
Gm38045 14 116750215 to 116751129 914 + unclassified gene predicted gene, 38045
Gm18836 14 116858715 to 116859400 685 - pseudogene predicted gene, 18836
Cpgi6842 14 116925169 to 116927206 2037 CpG island CpG island 6842
Tssr127141 14 116925205 to 116925218 13 + TSS region transcription start site region 127141
Tssr127142 14 116925259 to 116925280 21 + TSS region transcription start site region 127142
Tssr127143 14 116925291 to 116925362 71 + TSS region transcription start site region 127143
Gpc6 14 116925315 to 117976544 1051229 + protein coding gene glypican 6
Tssr127144 14 116925379 to 116925394 15 + TSS region transcription start site region 127144
Tssr127145 14 116925505 to 116925513 8 + TSS region transcription start site region 127145
Tssr127146 14 116925516 to 116925543 27 + TSS region transcription start site region 127146
Tssr127147 14 116925545 to 116925554 9 + TSS region transcription start site region 127147
Tssr127148 14 116925558 to 116925571 13 + TSS region transcription start site region 127148
Tssr127149 14 116925772 to 116925789 17 + TSS region transcription start site region 127149
Tssr127150 14 116925803 to 116925872 69 + TSS region transcription start site region 127150
Tssr130206 14 116947989 to 116947994 5 - TSS region transcription start site region 130206