Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:105258096-105783485

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9330172E22Rik 14 105227101 to 105259281 32180 unclassified gene RIKEN cDNA 9330172E22 gene
Cpgi6828 14 105258312 to 105259325 1013 CpG island CpG island 6828
Ndfip2 14 105258585 to 105309298 50713 + protein coding gene Nedd4 family interacting protein 2
Tssr127080 14 105258612 to 105258629 17 + TSS region transcription start site region 127080
Tssr127081 14 105258686 to 105258697 11 + TSS region transcription start site region 127081
Tssr127082 14 105258712 to 105258758 46 + TSS region transcription start site region 127082
Tssr127083 14 105258764 to 105258781 17 + TSS region transcription start site region 127083
Tssr127084 14 105258798 to 105258816 18 + TSS region transcription start site region 127084
Tssr127085 14 105258821 to 105258834 13 + TSS region transcription start site region 127085
Tssr127086 14 105258835 to 105258845 10 + TSS region transcription start site region 127086
Tssr127087 14 105258849 to 105258890 41 + TSS region transcription start site region 127087
Gm24207 14 105276879 to 105276986 107 - snRNA gene predicted gene, 24207
Gm16259 14 105292432 to 105292984 552 - pseudogene predicted gene 16259
D14Mit197 14 105317404 to 105317504 100 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 197
Tssr127088 14 105339876 to 105339887 11 + TSS region transcription start site region 127088
5430440P10Rik 14 105427559 to 105437716 10157 + lincRNA gene RIKEN cDNA 5430440P10 gene
4930449E01Rik 14 105498788 to 105505629 6841 + lncRNA gene RIKEN cDNA 4930449E01 gene
Tssr127089 14 105499818 to 105499853 35 + TSS region transcription start site region 127089
Tssr127090 14 105499999 to 105500046 47 + TSS region transcription start site region 127090
4930428F12Rik 14 105513195 to 105514793 1598 unclassified gene RIKEN cDNA 4930428F12 gene
Gm35909 14 105518096 to 105523485 5389 + lincRNA gene predicted gene, 35909
Tssr127091 14 105589506 to 105589531 25 + TSS region transcription start site region 127091
Tssr127092 14 105589532 to 105589546 14 + TSS region transcription start site region 127092
9330188P03Rik 14 105589549 to 105593929 4380 + lncRNA gene RIKEN cDNA 9330188P03 gene
Tssr127093 14 105589567 to 105589578 11 + TSS region transcription start site region 127093
Tssr127094 14 105589616 to 105589623 7 + TSS region transcription start site region 127094
Gm6145 14 105621015 to 105643725 22710 - unclassified non-coding RNA gene predicted gene 6145
Mir6390 14 105623642 to 105623770 128 - miRNA gene microRNA 6390
Tssr130157 14 105642030 to 105642068 38 - TSS region transcription start site region 130157
Tssr130158 14 105643665 to 105643687 22 - TSS region transcription start site region 130158
Tssr130159 14 105643690 to 105643712 22 - TSS region transcription start site region 130159
Tssr127095 14 105681824 to 105681831 7 + TSS region transcription start site region 127095
Gm10076 14 105681828 to 105682211 383 + pseudogene predicted gene 10076
Tssr127096 14 105681973 to 105681992 19 + TSS region transcription start site region 127096
Gm35967 14 105683351 to 105728364 45013 - lncRNA gene predicted gene, 35967