Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:105216973-106146992

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9330172E22Rik 14 105227101 to 105259281 32180 unclassified gene RIKEN cDNA 9330172E22 gene
Gm22290 14 105250010 to 105250116 106 + snRNA gene predicted gene, 22290
Cpgi6828 14 105258312 to 105259325 1013 CpG island CpG island 6828
Ndfip2 14 105258585 to 105309298 50713 + protein coding gene Nedd4 family interacting protein 2
Tssr127080 14 105258612 to 105258629 17 + TSS region transcription start site region 127080
Tssr127081 14 105258686 to 105258697 11 + TSS region transcription start site region 127081
Tssr127082 14 105258712 to 105258758 46 + TSS region transcription start site region 127082
Tssr127083 14 105258764 to 105258781 17 + TSS region transcription start site region 127083
Tssr127084 14 105258798 to 105258816 18 + TSS region transcription start site region 127084
Tssr127085 14 105258821 to 105258834 13 + TSS region transcription start site region 127085
Tssr127086 14 105258835 to 105258845 10 + TSS region transcription start site region 127086
Tssr127087 14 105258849 to 105258890 41 + TSS region transcription start site region 127087
Gm24207 14 105276879 to 105276986 107 - snRNA gene predicted gene, 24207
Gm16259 14 105292432 to 105292984 552 - pseudogene predicted gene 16259
D14Mit197 14 105317404 to 105317504 100 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 197
Tssr127088 14 105339876 to 105339887 11 + TSS region transcription start site region 127088
5430440P10Rik 14 105427559 to 105437716 10157 + lincRNA gene RIKEN cDNA 5430440P10 gene
4930449E01Rik 14 105498788 to 105505629 6841 + lncRNA gene RIKEN cDNA 4930449E01 gene
Tssr127089 14 105499818 to 105499853 35 + TSS region transcription start site region 127089
Tssr127090 14 105499999 to 105500046 47 + TSS region transcription start site region 127090
4930428F12Rik 14 105513195 to 105514793 1598 unclassified gene RIKEN cDNA 4930428F12 gene
Gm35909 14 105518096 to 105523485 5389 + lincRNA gene predicted gene, 35909
Tssr127091 14 105589506 to 105589531 25 + TSS region transcription start site region 127091
Tssr127092 14 105589532 to 105589546 14 + TSS region transcription start site region 127092
9330188P03Rik 14 105589549 to 105593929 4380 + lncRNA gene RIKEN cDNA 9330188P03 gene
Tssr127093 14 105589567 to 105589578 11 + TSS region transcription start site region 127093
Tssr127094 14 105589616 to 105589623 7 + TSS region transcription start site region 127094
Gm6145 14 105621015 to 105643725 22710 - unclassified non-coding RNA gene predicted gene 6145
Mir6390 14 105623642 to 105623770 128 - miRNA gene microRNA 6390
Tssr130157 14 105642030 to 105642068 38 - TSS region transcription start site region 130157
Tssr130158 14 105643665 to 105643687 22 - TSS region transcription start site region 130158
Tssr130159 14 105643690 to 105643712 22 - TSS region transcription start site region 130159
Tssr127095 14 105681824 to 105681831 7 + TSS region transcription start site region 127095
Gm10076 14 105681828 to 105682211 383 + pseudogene predicted gene 10076
Tssr127096 14 105681973 to 105681992 19 + TSS region transcription start site region 127096
Gm35967 14 105683351 to 105728364 45013 - lncRNA gene predicted gene, 35967
D14Mit167 14 105815181 to 105815311 130 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 167
Gm22406 14 105816908 to 105817000 92 + miRNA gene predicted gene, 22406
Gm41239 14 105822646 to 105829650 7004 + lncRNA gene predicted gene, 41239
Gm48970 14 105853073 to 105862501 9428 - lincRNA gene predicted gene, 48970
Tssr130160 14 105859180 to 105859191 11 - TSS region transcription start site region 130160
Spry2 14 105891947 to 105896819 4872 - protein coding gene sprouty RTK signaling antagonist 2
Tssr130161 14 105892592 to 105892596 4 - TSS region transcription start site region 130161
Tssr130162 14 105892827 to 105892848 21 - TSS region transcription start site region 130162
Cpgi6829 14 105893251 to 105893511 260 CpG island CpG island 6829
Cpgi6830 14 105894918 to 105895382 464 CpG island CpG island 6830
Cpgi6831 14 105895952 to 105898008 2056 CpG island CpG island 6831
Tssr127097 14 105896122 to 105896134 12 + TSS region transcription start site region 127097
Tssr130163 14 105897116 to 105897132 16 - TSS region transcription start site region 130163
Tssr130164 14 105897310 to 105897358 48 - TSS region transcription start site region 130164
Tssr127098 14 105897390 to 105897449 59 + TSS region transcription start site region 127098
Tssr127099 14 105897484 to 105897496 12 + TSS region transcription start site region 127099
Tssr130165 14 105897717 to 105897728 11 - TSS region transcription start site region 130165
Tssr130166 14 105897732 to 105897778 46 - TSS region transcription start site region 130166
Tssr127100 14 105897920 to 105897938 18 + TSS region transcription start site region 127100
Cpgi6832 14 105898486 to 105899325 839 CpG island CpG island 6832
Tssr127101 14 105921741 to 105921743 2 + TSS region transcription start site region 127101
Tssr130167 14 105922600 to 105922609 9 - TSS region transcription start site region 130167
Tssr127102 14 106023044 to 106023079 35 + TSS region transcription start site region 127102
Frg2f4 14 106093234 to 106093482 248 - protein coding gene FSHD region gene 2 family member 4
Gm4775 14 106100765 to 106101166 401 - pseudogene predicted gene 4775
Tssr130168 14 106101180 to 106101189 9 - TSS region transcription start site region 130168
Cpgi6833 14 106106083 to 106106843 760 CpG island CpG island 6833
Tssr127103 14 106106183 to 106106205 22 + TSS region transcription start site region 127103
Trim52 14 106106198 to 106135859 29661 + protein coding gene tripartite motif-containing 52
Tssr127104 14 106106220 to 106106228 8 + TSS region transcription start site region 127104
Cpgi6834 14 106107297 to 106107523 226 CpG island CpG island 6834
Tssr127105 14 106120906 to 106120912 6 + TSS region transcription start site region 127105