Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:105212559-105652716

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9330172E22Rik 14 105227101 to 105259281 32180 unclassified gene RIKEN cDNA 9330172E22 gene
Gm22290 14 105250010 to 105250116 106 + snRNA gene predicted gene, 22290
Cpgi6828 14 105258312 to 105259325 1013 CpG island CpG island 6828
Ndfip2 14 105258585 to 105309298 50713 + protein coding gene Nedd4 family interacting protein 2
Tssr127080 14 105258612 to 105258629 17 + TSS region transcription start site region 127080
Tssr127081 14 105258686 to 105258697 11 + TSS region transcription start site region 127081
Tssr127082 14 105258712 to 105258758 46 + TSS region transcription start site region 127082
Tssr127083 14 105258764 to 105258781 17 + TSS region transcription start site region 127083
Tssr127084 14 105258798 to 105258816 18 + TSS region transcription start site region 127084
Tssr127085 14 105258821 to 105258834 13 + TSS region transcription start site region 127085
Tssr127086 14 105258835 to 105258845 10 + TSS region transcription start site region 127086
Tssr127087 14 105258849 to 105258890 41 + TSS region transcription start site region 127087
Gm24207 14 105276879 to 105276986 107 - snRNA gene predicted gene, 24207
Gm16259 14 105292432 to 105292984 552 - pseudogene predicted gene 16259
D14Mit197 14 105317404 to 105317504 100 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 197
Tssr127088 14 105339876 to 105339887 11 + TSS region transcription start site region 127088
5430440P10Rik 14 105427559 to 105437716 10157 + lincRNA gene RIKEN cDNA 5430440P10 gene
4930449E01Rik 14 105498788 to 105505629 6841 + lncRNA gene RIKEN cDNA 4930449E01 gene
Tssr127089 14 105499818 to 105499853 35 + TSS region transcription start site region 127089
Tssr127090 14 105499999 to 105500046 47 + TSS region transcription start site region 127090
4930428F12Rik 14 105513195 to 105514793 1598 unclassified gene RIKEN cDNA 4930428F12 gene
Gm35909 14 105518096 to 105523485 5389 + lincRNA gene predicted gene, 35909
Tssr127091 14 105589506 to 105589531 25 + TSS region transcription start site region 127091
Tssr127092 14 105589532 to 105589546 14 + TSS region transcription start site region 127092
9330188P03Rik 14 105589549 to 105593929 4380 + lncRNA gene RIKEN cDNA 9330188P03 gene
Tssr127093 14 105589567 to 105589578 11 + TSS region transcription start site region 127093
Tssr127094 14 105589616 to 105589623 7 + TSS region transcription start site region 127094
Gm6145 14 105621015 to 105643725 22710 - unclassified non-coding RNA gene predicted gene 6145
Mir6390 14 105623642 to 105623770 128 - miRNA gene microRNA 6390
Tssr130157 14 105642030 to 105642068 38 - TSS region transcription start site region 130157
Tssr130158 14 105643665 to 105643687 22 - TSS region transcription start site region 130158
Tssr130159 14 105643690 to 105643712 22 - TSS region transcription start site region 130159