Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:103844333-105074337

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35197 14 103719026 to 103867713 148687 + lncRNA gene predicted gene, 35197
Ednrb 14 103814625 to 103844402 29777 - protein coding gene endothelin receptor type B
Cpgi6819 14 103843005 to 103844416 1411 CpG island CpG island 6819
Tssr130135 14 103844314 to 103844340 26 - TSS region transcription start site region 130135
Tssr130136 14 103844344 to 103844359 15 - TSS region transcription start site region 130136
Tssr130137 14 103844391 to 103844403 12 - TSS region transcription start site region 130137
Tssr130138 14 103844420 to 103844432 12 - TSS region transcription start site region 130138
Tssr130139 14 103844448 to 103844464 16 - TSS region transcription start site region 130139
4930518C04Rik 14 103898761 to 103900644 1883 + lncRNA gene RIKEN cDNA 4930518C04 gene
Tssr127075 14 103899479 to 103899488 9 + TSS region transcription start site region 127075
Gm37910 14 103948096 to 103949811 1715 + unclassified gene predicted gene, 37910
4930432J09Rik 14 103977628 to 104027142 49514 - lincRNA gene RIKEN cDNA 4930432J09 gene
Tssr130140 14 103998251 to 103998260 9 - TSS region transcription start site region 130140
Tssr130141 14 103998273 to 103998284 11 - TSS region transcription start site region 130141
Gm41238 14 104007205 to 104039607 32402 + lncRNA gene predicted gene, 41238
Gm41237 14 104032324 to 104034925 2601 - lncRNA gene predicted gene, 41237
D14Mit94 14 104096972 to 104097072 100 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 94
Tssr127076 14 104129058 to 104129059 1 + TSS region transcription start site region 127076
Gm35308 14 104151377 to 104153369 1992 + lncRNA gene predicted gene, 35308
Tssr127077 14 104190988 to 104191008 20 + TSS region transcription start site region 127077
D130079A08Rik 14 104288431 to 104459336 170905 - lincRNA gene RIKEN cDNA D130079A08 gene
Gm35362 14 104445370 to 104456277 10907 + lncRNA gene predicted gene, 35362
Tssr130142 14 104459333 to 104459337 4 - TSS region transcription start site region 130142
Tssr130143 14 104459483 to 104459486 3 - TSS region transcription start site region 130143
Cpgi6820 14 104460488 to 104460836 348 CpG island CpG island 6820
Cpgi6821 14 104460954 to 104461167 213 CpG island CpG island 6821
Pou4f1 14 104461676 to 104467999 6323 - protein coding gene POU domain, class 4, transcription factor 1
Tssr130144 14 104464656 to 104464662 6 - TSS region transcription start site region 130144
Cpgi6822 14 104465361 to 104468675 3314 CpG island CpG island 6822
Tssr130145 14 104467984 to 104468041 57 - TSS region transcription start site region 130145
Gm35623 14 104468198 to 104477234 9036 + lncRNA gene predicted gene, 35623
Cpgi6823 14 104472908 to 104473515 607 CpG island CpG island 6823
Cpgi6824 14 104473778 to 104474197 419 CpG island CpG island 6824
Rnf219 14 104477536 to 104522645 45109 - protein coding gene ring finger protein 219
Gm49205 14 104481491 to 104482283 792 + pseudogene predicted gene, 49205
Tssr130146 14 104521802 to 104521806 4 - TSS region transcription start site region 130146
Cpgi6825 14 104522044 to 104522841 797 CpG island CpG island 6825
Tssr130147 14 104522615 to 104522707 92 - TSS region transcription start site region 130147
Gm22021 14 104591094 to 104591200 106 + snRNA gene predicted gene, 22021
Gm35680 14 104600549 to 104607850 7301 + lncRNA gene predicted gene, 35680
Gm25724 14 104628944 to 104629060 116 - snoRNA gene predicted gene, 25724
D130009I18Rik 14 104639144 to 104966783 327639 + lincRNA gene RIKEN cDNA D130009I18 gene
Cpgi6826 14 104796497 to 104796683 186 CpG island CpG island 6826
Gm24280 14 104971427 to 104971560 133 + snoRNA gene predicted gene, 24280
Tssr127078 14 105043412 to 105043428 16 + TSS region transcription start site region 127078
Gm5671 14 105043450 to 105044354 904 + pseudogene predicted gene 5671
D14Mit205 14 105054651 to 105054760 109 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 205